C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC14-like 1 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129657 SEC14L1 9606 + 17:77086716-77217101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392476 SEC14L1-012 77088749-77216802 protein_coding
  ENST00000430767 SEC14L1-014 77089155-77216802 protein_coding
  ENST00000431431 SEC14L1-003 77185213-77214271 protein_coding
  ENST00000436233 SEC14L1-001 77140979-77216906 protein_coding
  ENST00000443798 SEC14L1-002 77141032-77217101 protein_coding
  ENST00000561633 SEC14L1-029 77088749-77099196 processed_transcript
  ENST00000561721 SEC14L1-013 77088749-77143638 protein_coding
  ENST00000564414 SEC14L1-027 77086716-77099174 processed_transcript
  ENST00000564509 SEC14L1-028 77088749-77099196 processed_transcript
  ENST00000568056 SEC14L1-026 77086716-77099174 processed_transcript
  ENST00000569632 SEC14L1-030 77088777-77099174 processed_transcript
  ENST00000585618 SEC14L1-004 77140932-77214329 protein_coding
  ENST00000586390 SEC14L1-019 77130094-77191307 processed_transcript
  ENST00000586429 SEC14L1-018 77127873-77190952 protein_coding
  ENST00000587491 SEC14L1-005 77209861-77214331 retained_intron
  ENST00000587820 SEC14L1-006 77141386-77190920 protein_coding
  ENST00000587821 SEC14L1-009 77205207-77206862 retained_intron
  ENST00000588488 SEC14L1-024 77206815-77214360 protein_coding
  ENST00000588616 SEC14L1-021 77181037-77194733 protein_coding
  ENST00000588696 SEC14L1-007 77141070-77143860 retained_intron
  ENST00000588721 SEC14L1-011 77212715-77214347 processed_transcript
  ENST00000588880 SEC14L1-017 77140736-77143642 protein_coding
  ENST00000589202 SEC14L1-023 77193421-77195031 protein_coding
  ENST00000589827 SEC14L1-015 77088749-77206395 protein_coding
  ENST00000590483 SEC14L1-022 77190803-77193549 protein_coding
  ENST00000591413 SEC14L1-010 77211737-77213766 retained_intron
  ENST00000591437 SEC14L1-025 77144646-77214360 protein_coding
  ENST00000591786 SEC14L1-020 77143597-77194757 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392476ENST00000430767ENST00000431431ENST00000436233ENST00000443798ENST00000585618ENST00000590483ENST00000591437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.998±0.00 4.531±0.00 N/A N/A
ENST00000430767 N/A N/A N/A N/A N/A 1.814±0.00 N/A N/A N/A N/A N/A 2.564±0.00 N/A N/A
ENST00000431431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.626±0.00 N/A N/A
ENST00000436233 44.087±0.00 5.504±0.00 6.307±0.00 11.483±9.15 5.375±3.07 17.941±0.00 8.044±6.56 16.762±15.00 3.734±1.43 29.447±24.42 3.813±2.57 5.319±3.10 14.066±6.71 19.169±7.39
ENST00000443798 23.219±0.00 9.377±0.00 N/A 10.451±5.55 8.784±0.00 6.175±3.35 3.771±2.53 16.204±0.00 2.479±0.00 31.239±0.00 6.861±1.52 13.183±0.00 18.271±4.71 21.895±8.84
ENST00000585618 N/A N/A N/A N/A 6.195±0.00 N/A N/A 3.024±0.00 N/A 3.845±0.00 N/A N/A N/A N/A
ENST00000590483 N/A N/A 58.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591437 N/A N/A N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000198 CIL_000198_0001 CGP 17:76868456-77217101
CIL_000199 CIL_000199_0001 CGP 17:77086716-77500596

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 TAS Golgi apparatus
GO:0006810 IEA transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019301 sec14l1 SEC14-like 1 (S. cerevisiae) protein_coding Danio_rerio
ENSDARG00000086013 SEC14L1 SEC14-like 1 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000020823 Sec14l1 SEC14-like 1 (S. cerevisiae) protein_coding Mus_musculus

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