C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTP binding protein 3 (mitochondrial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130299 GTPBP3 9606 + 19:17334920-17342735 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324894 GTPBP3-004 17337544-17342735 protein_coding
  ENST00000358792 GTPBP3-006 17337555-17342022 protein_coding
  ENST00000361619 GTPBP3-001 17334920-17341968 protein_coding
  ENST00000593297 GTPBP3-025 17337559-17338740 processed_transcript
  ENST00000594018 GTPBP3-022 17337592-17341056 nonsense_mediated_decay
  ENST00000594345 GTPBP3-013 17336692-17338741 processed_transcript
  ENST00000594703 GTPBP3-028 17338760-17339479 retained_intron
  ENST00000595194 GTPBP3-029 17340946-17341664 retained_intron
  ENST00000595381 GTPBP3-012 17336686-17337348 processed_transcript
  ENST00000595951 GTPBP3-014 17336728-17337975 processed_transcript
  ENST00000596001 GTPBP3-021 17337586-17339161 retained_intron
  ENST00000596125 GTPBP3-030 17339389-17341631 retained_intron
  ENST00000596166 GTPBP3-019 17337559-17339487 processed_transcript
  ENST00000596218 GTPBP3-016 17336973-17339015 processed_transcript
  ENST00000596941 GTPBP3-017 17336873-17338719 processed_transcript
  ENST00000598038 GTPBP3-002 17336724-17342730 processed_transcript
  ENST00000598493 GTPBP3-007 17337559-17341125 nonsense_mediated_decay
  ENST00000598532 GTPBP3-010 17335000-17337260 processed_transcript
  ENST00000599329 GTPBP3-023 17337618-17338433 retained_intron
  ENST00000599429 GTPBP3-018 17337517-17338451 retained_intron
  ENST00000600610 GTPBP3-009 17337588-17339572 nonsense_mediated_decay
  ENST00000600625 GTPBP3-005 17337555-17342723 protein_coding
  ENST00000600995 GTPBP3-015 17336728-17338708 processed_transcript
  ENST00000601213 GTPBP3-011 17335000-17338675 nonsense_mediated_decay
  ENST00000601261 GTPBP3-024 17337559-17338682 retained_intron
  ENST00000601983 GTPBP3-026 17338196-17339144 retained_intron
  ENST00000602056 GTPBP3-027 17338758-17341325 retained_intron
  ENST00000602165 GTPBP3-020 17337571-17338743 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324894ENST00000358792ENST00000361619ENST00000593297ENST00000594345ENST00000595194ENST00000595381ENST00000595951ENST00000596001ENST00000596125ENST00000596941ENST00000598038ENST00000599329ENST00000600625ENST00000600995ENST00000601213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324894 N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.375±0.00 N/A 0.474±0.00
ENST00000358792 1.700±0.00 2.311±0.00 N/A 1.152±0.85 1.177±0.00 0.324±0.00 0.727±0.00 1.073±0.00 N/A 1.719±0.00 N/A 4.019±0.00 N/A N/A
ENST00000361619 N/A N/A N/A 1.038±0.54 1.797±0.43 N/A N/A N/A 0.534±0.08 0.133±0.00 1.079±0.10 N/A N/A N/A
ENST00000593297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.070±0.00
ENST00000594345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 N/A N/A
ENST00000595194 N/A N/A N/A N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595381 N/A N/A 0.725±0.00 N/A 3.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595951 N/A N/A N/A N/A N/A N/A N/A 1.421±0.00 N/A 0.873±0.00 N/A N/A N/A N/A
ENST00000596001 N/A N/A N/A N/A N/A 1.571±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.993±0.00 N/A N/A
ENST00000596941 N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000598038 N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599329 N/A N/A N/A N/A N/A N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A
ENST00000600625 1.790±0.00 3.166±0.00 N/A 1.416±0.00 2.745±0.00 1.185±0.00 0.787±0.00 0.998±0.66 0.882±0.00 0.489±0.00 0.888±0.00 3.380±0.65 1.447±0.12 1.674±0.00
ENST00000600995 N/A N/A N/A N/A N/A N/A N/A N/A 0.362±0.00 N/A N/A N/A N/A N/A
ENST00000601213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.413±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E0 CIL_0004E0_0002 CGP 19:17323223-17342735
CIL_00061V CIL_00061V_0001 CGP 19:17334920-17377350

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0006400 IEA tRNA modification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018650 gtpbp3 GTP binding protein 3 protein_coding Danio_rerio
ENSMUSG00000007610 Gtpbp3 GTP binding protein 3 protein_coding Mus_musculus

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