Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	calcium channel, voltage-dependent, gamma subunit 6
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000130433	CACNG6	9606	+	19:53992288-54012669	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000252729		CACNG6-001	53992288-54012669	protein_coding
	ENST00000346968		CACNG6-002	53992878-54012189	protein_coding
	ENST00000352529		CACNG6-201	53992288-54012664	protein_coding

Expression Patterns

Transcript ID	Brain	Breast	Colon	Heart	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000252729	0.166±0.00	1.458±0.00	0.015±0.00	N/A	N/A	0.321±0.00	15.202±8.63	0.768±0.00	N/A	1.044±0.00
ENST00000346968	0.196±0.00	1.363±0.00	N/A	N/A	N/A	0.995±0.91	N/A	1.575±0.00	N/A	N/A
ENST00000352529	0.187±0.00	N/A	N/A	0.096±0.00	0.016±0.00	2.908±0.00	4.116±0.00	N/A	0.055±0.00	0.506±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0001VE	CIL_0001VE_0001	CGP	19:53963040-54012669

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005244	IEA	voltage-gated ion channel activity
GO:0005245	NAS	voltage-gated calcium channel activity
GO:0005262	IEA	calcium channel activity
GO:0005891	NAS	voltage-gated calcium channel complex
GO:0006816	NAS	calcium ion transport
GO:0016020	IEA	membrane
GO:0016021	IEA	integral component of membrane
GO:0034765	IEA	regulation of ion transmembrane transport
GO:0070588	IEA	calcium ion transmembrane transport

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000036457	cacng6a	calcium channel, voltage-dependent, gamma subunit 6a	protein_coding	Danio_rerio
ENSDARG00000046079	cacng6b	calcium channel, voltage-dependent, gamma subunit 6b	protein_coding	Danio_rerio
ENSMUSG00000078815	Cacng6	calcium channel, voltage-dependent, gamma subunit 6	protein_coding	Mus_musculus

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