C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule-associated protein 1S
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130479 MAP1S 9606 + 19:17719242-17734516 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324096 MAP1S-001 17719352-17734516 protein_coding
  ENST00000544059 MAP1S-003 17720156-17734490 protein_coding
  ENST00000593593 MAP1S-013 17720164-17725089 nonsense_mediated_decay
  ENST00000594212 MAP1S-002 17719480-17726543 nonsense_mediated_decay
  ENST00000594340 MAP1S-010 17719771-17725964 processed_transcript
  ENST00000594365 MAP1S-012 17720161-17726000 nonsense_mediated_decay
  ENST00000594625 MAP1S-004 17719242-17725953 protein_coding
  ENST00000595338 MAP1S-015 17720201-17725917 processed_transcript
  ENST00000596637 MAP1S-014 17720191-17724195 nonsense_mediated_decay
  ENST00000597000 MAP1S-019 17727438-17734513 protein_coding
  ENST00000597067 MAP1S-011 17719781-17725855 processed_transcript
  ENST00000597681 MAP1S-009 17719497-17728111 processed_transcript
  ENST00000597735 MAP1S-006 17719480-17733338 protein_coding
  ENST00000598756 MAP1S-020 17728148-17734350 processed_transcript
  ENST00000598769 MAP1S-016 17720724-17726007 retained_intron
  ENST00000598916 MAP1S-017 17720752-17725975 processed_transcript
  ENST00000599494 MAP1S-018 17720136-17726050 processed_transcript
  ENST00000600186 MAP1S-005 17719480-17726050 protein_coding
  ENST00000600608 MAP1S-007 17719480-17724208 nonsense_mediated_decay
  ENST00000601097 MAP1S-021 17733020-17734513 retained_intron
  ENST00000601544 MAP1S-008 17719484-17725944 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324096ENST00000544059ENST00000596637ENST00000597000ENST00000597681ENST00000597735ENST00000598756ENST00000598916ENST00000599494ENST00000600186ENST00000601097ENST00000601544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324096 11.387±0.00 N/A N/A 13.523±12.48 6.511±6.37 6.561±6.32 2.766±2.71 1.575±1.53 0.831±0.55 5.780±0.00 7.939±7.85 23.803±13.04 10.589±5.58 18.023±0.79
ENST00000544059 N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.430±0.00
ENST00000596637 N/A N/A N/A N/A N/A N/A N/A N/A 1.988±0.00 N/A N/A N/A N/A N/A
ENST00000597000 N/A N/A 0.338±0.00 N/A N/A N/A 0.259±0.00 N/A N/A N/A N/A N/A 8.487±0.00 22.855±0.00
ENST00000597681 12.685±0.00 20.857±0.00 N/A N/A 12.227±0.00 N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A 26.013±0.00
ENST00000597735 N/A N/A N/A N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598756 N/A N/A N/A N/A N/A N/A N/A 0.283±0.00 N/A N/A N/A N/A N/A N/A
ENST00000598916 N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599494 N/A N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A N/A N/A 3.615±0.00 N/A N/A
ENST00000600186 N/A N/A N/A N/A N/A N/A N/A 0.762±0.00 N/A N/A N/A N/A N/A N/A
ENST00000601097 N/A N/A N/A N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601544 N/A N/A N/A N/A N/A N/A 0.283±0.00 N/A N/A 1.736±0.00 N/A 1.358±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0001578 IMP microtubule bundle formation
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005874 IDA microtubule
GO:0006309 TAS apoptotic DNA fragmentation
GO:0007399 ISS nervous system development
GO:0007420 ISS brain development
GO:0008017 TAS microtubule binding
GO:0015630 IEA microtubule cytoskeleton
GO:0015631 IDA tubulin binding
GO:0030054 IDA cell junction
GO:0030425 ISS dendrite
GO:0042802 IEA identical protein binding
GO:0042995 IDA cell projection
GO:0043025 ISS neuronal cell body
GO:0045202 IDA synapse
GO:0047497 TAS mitochondrion transport along microtubule
GO:0048471 IDA perinuclear region of cytoplasm
GO:0048487 IDA beta-tubulin binding
GO:0048812 IEP neuron projection morphogenesis
GO:0051015 IDA actin filament binding
GO:0097194 IDA execution phase of apoptosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060326 MAP1S (1 of 2) microtubule-associated protein 1S protein_coding Danio_rerio
ENSDARG00000060805 MAP1S (2 of 2) microtubule-associated protein 1S protein_coding Danio_rerio
ENSMUSG00000019261 Map1s microtubule-associated protein 1S protein_coding Mus_musculus

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