C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H19, imprinted maternally expressed transcript (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130600 H19 9606 - 11:1995163-2001470 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000411754 H19-008 1995237-1997797 lincRNA
  ENST00000411861 H19-004 1995176-1997217 retained_intron
  ENST00000412788 H19-002 1995176-1997814 lincRNA
  ENST00000414790 H19-001 1995163-1997875 lincRNA
  ENST00000417089 H19-005 1995234-1997025 lincRNA
  ENST00000422826 H19-009 1995210-1997797 lincRNA
  ENST00000428066 H19-012 1995683-2001470 lincRNA
  ENST00000431095 H19-007 1995237-1997815 lincRNA
  ENST00000436715 H19-013 1995439-1996571 retained_intron
  ENST00000439725 H19-003 1995176-1997460 lincRNA
  ENST00000442037 H19-015 1995176-1996191 lincRNA
  ENST00000446406 H19-006 1995216-1997827 lincRNA
  ENST00000447298 H19-014 1995688-1996467 lincRNA

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000411754ENST00000411861ENST00000412788ENST00000414790ENST00000417089ENST00000422826ENST00000431095ENST00000436715ENST00000439725ENST00000442037ENST00000446406ENST00000447298
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000411754 N/A N/A N/A N/A N/A 1.717±0.00 N/A N/A N/A 1.282±0.00 N/A N/A N/A N/A
ENST00000411861 N/A N/A 2.618±0.00 0.099±0.00 N/A 1.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412788 335.970±0.00 62.150±0.00 1.881±0.00 N/A 377.941±0.00 128.639±0.00 42.960±41.13 70.508±0.00 15.788±0.00 13.191±11.95 699.575±0.00 360.692±459.57 3902.327±1534.30 131.307±94.72
ENST00000414790 94.189±0.00 17.026±0.00 N/A 0.243±0.00 89.777±0.00 62.320±0.00 17.910±14.77 25.149±0.00 17.101±10.43 9.254±7.39 268.079±0.00 187.915±91.23 6918.910±573.73 162.472±0.00
ENST00000417089 N/A N/A N/A 0.168±0.00 N/A N/A 55.628±0.00 26.241±0.00 28.695±0.00 20.576±0.00 366.381±0.00 N/A N/A N/A
ENST00000422826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3635.720±0.00 26.573±0.00
ENST00000431095 N/A N/A 8.724±0.00 N/A N/A N/A N/A N/A 18.077±0.00 N/A 21.007±0.00 N/A N/A N/A
ENST00000436715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1720.930±0.00 N/A 50.584±0.00
ENST00000439725 N/A N/A N/A N/A N/A N/A N/A 11.656±0.00 7.436±0.00 N/A 25.877±0.00 22.220±0.00 N/A N/A
ENST00000442037 N/A N/A 5.836±0.00 N/A 6.178±0.00 2.474±0.00 4.308±0.00 N/A N/A N/A 59.575±0.00 N/A N/A N/A
ENST00000446406 N/A N/A N/A N/A 4.574±0.00 0.816±0.00 1.565±0.00 8.342±0.00 N/A N/A N/A 85.430±41.22 3056.960±241.99 N/A
ENST00000447298 N/A N/A 6.442±0.00 0.515±0.15 14.323±0.00 N/A 4.862±0.00 27.658±0.00 48.781±0.00 N/A 69.710±0.00 1517.934±1420.74 11729.000±0.00 62.467±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0001 VISTA 11:1663842-2266142
CIL_0007RG CIL_0007RG_0001 VISTA 11:1668349-2271510
CIL_00097V CIL_00097V_0001 VISTA 11:1688064-2293510
CIL_0005N8 CIL_0005N8_0002 CGP 11:1947278-2149603

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

Loading