C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCCH-type containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130749 ZC3H4 9606 - 19:47064187-47113752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253048 ZC3H4-001 47064187-47113752 protein_coding
  ENST00000594019 ZC3H4-002 47064859-47112229 processed_transcript
  ENST00000595341 ZC3H4-005 47093749-47094487 retained_intron
  ENST00000597069 ZC3H4-003 47090019-47112247 processed_transcript
  ENST00000601973 ZC3H4-004 47064192-47085355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000253048ENST00000597069ENST00000601973
Transcript ID Adipose Adrenal Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000253048 1.605±0.00 8.195±0.00 N/A 1.474±0.00 1.862±0.00 0.942±0.00 0.215±0.00 2.738±1.53 2.034±0.36 7.140±2.39
ENST00000597069 N/A N/A 4.863±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601973 N/A N/A N/A N/A N/A 0.833±0.00 N/A 6.413±3.19 1.668±1.38 3.840±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636
CIL_00044A CIL_00044A_0002 CGP 19:47064187-47210636

Gene Ontology
GO IDEvidence TypeGO Description
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078355 zc3h4 zinc finger CCCH-type containing 4 protein_coding Danio_rerio
ENSMUSG00000059273 Zc3h4 zinc finger CCCH-type containing 4 protein_coding Mus_musculus

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