C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 3, subunit G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130811 EIF3G 9606 - 19:10115017-10119920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253108 EIF3G-001 10115017-10119902 protein_coding
  ENST00000586151 EIF3G-010 10117085-10119875 nonsense_mediated_decay
  ENST00000587146 EIF3G-019 10115737-10119886 protein_coding
  ENST00000587168 EIF3G-012 10118884-10119848 processed_transcript
  ENST00000587590 EIF3G-005 10116418-10119875 retained_intron
  ENST00000587681 EIF3G-008 10118370-10119908 retained_intron
  ENST00000587993 EIF3G-009 10116943-10119878 nonsense_mediated_decay
  ENST00000588709 EIF3G-018 10115742-10119899 protein_coding
  ENST00000589009 EIF3G-004 10116050-10119905 retained_intron
  ENST00000589454 EIF3G-006 10115534-10119864 protein_coding
  ENST00000589458 EIF3G-002 10118098-10119920 retained_intron
  ENST00000589674 EIF3G-016 10116901-10117590 retained_intron
  ENST00000590158 EIF3G-014 10115062-10116688 retained_intron
  ENST00000590647 EIF3G-015 10119021-10119451 retained_intron
  ENST00000590940 EIF3G-013 10118076-10119700 retained_intron
  ENST00000592485 EIF3G-003 10118887-10119918 retained_intron
  ENST00000593054 EIF3G-017 10115018-10116827 protein_coding
  ENST00000593066 EIF3G-011 10116836-10119869 nonsense_mediated_decay
  ENST00000593095 EIF3G-007 10116936-10119918 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253108ENST00000587146ENST00000589454ENST00000589674ENST00000593066
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253108 161.612±0.00 244.130±0.00 4.835±0.00 32.374±13.26 92.588±72.35 87.510±71.74 26.947±15.67 45.046±15.79 33.358±2.66 40.001±22.32 128.211±86.36 194.814±145.26 178.692±52.90 136.164±41.38
ENST00000587146 N/A N/A N/A 15.080±0.00 17.687±0.00 11.292±0.00 5.176±0.00 7.932±0.00 N/A 26.645±16.26 21.226±0.00 12.692±0.00 N/A N/A
ENST00000589454 41.298±0.00 N/A N/A 24.264±0.00 N/A 55.558±0.00 27.266±0.00 35.045±0.00 18.915±0.00 54.653±0.00 97.469±0.00 N/A N/A 91.112±0.00
ENST00000589674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 85.943±0.00
ENST00000593066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 72.676±0.00 58.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BQ CIL_0004BQ_0002 CGP 19:10115017-10231286

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001731 IEA formation of translation preinitiation complex
GO:0003676 IEA nucleic acid binding
GO:0003743 IC:IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005852 IDA:IEA eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IC translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016889 eif3g eukaryotic translation initiation factor 3, subunit G protein_coding Danio_rerio
ENSMUSG00000070319 Eif3g eukaryotic translation initiation factor 3, subunit G protein_coding Mus_musculus

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