C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131100 ATP6V1E1 9606 - 22:17592136-17628818 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253413 ATP6V1E1-001 17592136-17628818 protein_coding
  ENST00000399796 ATP6V1E1-006 17592169-17628747 protein_coding
  ENST00000399798 ATP6V1E1-005 17592409-17628749 protein_coding
  ENST00000413576 ATP6V1E1-004 17594539-17628733 protein_coding
  ENST00000460085 ATP6V1E1-002 17612976-17628749 processed_transcript
  ENST00000473248 ATP6V1E1-009 17592669-17595292 retained_intron
  ENST00000478963 ATP6V1E1-003 17612614-17628748 processed_transcript
  ENST00000481365 ATP6V1E1-008 17598001-17619528 retained_intron
  ENST00000484653 ATP6V1E1-007 17600680-17619528 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253413ENST00000399796ENST00000399798ENST00000478963ENST00000481365
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253413 12.639±0.00 20.553±0.00 8.137±0.00 51.088±4.47 13.378±2.11 17.246±10.98 27.025±17.16 38.898±36.63 13.253±1.62 20.579±9.26 17.634±12.98 28.278±20.03 60.331±32.10 11.442±4.16
ENST00000399796 18.292±0.00 16.375±0.00 1.547±0.00 56.279±24.92 9.840±0.00 15.299±0.00 35.342±0.00 14.073±7.51 17.094±0.00 31.322±0.00 13.667±10.49 N/A N/A 27.210±0.00
ENST00000399798 25.845±0.00 29.947±0.00 N/A 75.004±0.00 29.469±0.00 24.950±0.00 N/A 26.007±0.00 N/A N/A N/A 17.076±13.17 48.686±0.00 24.663±2.76
ENST00000478963 N/A N/A N/A N/A 4.645±0.00 4.120±0.00 N/A 3.717±0.00 N/A 5.447±0.00 4.736±0.00 N/A N/A N/A
ENST00000481365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.899±0.00 8.998±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A0 CIL_0002A0_0001 CGP 22:17563439-17628818
CIL_000241 CIL_000241_0001 CGP 22:17592136-17730855

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005765 IDA lysosomal membrane
GO:0005768 ISS endosome
GO:0005829 ISS cytosol
GO:0005902 IEA microvillus
GO:0006879 TAS cellular iron ion homeostasis
GO:0008152 IEA metabolic process
GO:0008286 TAS insulin receptor signaling pathway
GO:0008553 IEA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 TAS proton transport
GO:0016324 ISS apical plasma membrane
GO:0016469 TAS proton-transporting two-sector ATPase complex
GO:0033178 IEA proton-transporting two-sector ATPase complex, catalytic domain
GO:0033572 TAS transferrin transport
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0051117 IPI ATPase binding
GO:0051701 TAS interaction with host
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014085 si:ch211-266k8.3 si:ch211-266k8.3 protein_coding Danio_rerio
ENSDARG00000030694 atp6v1e1b ATPase, H+ transporting, lysosomal, V1 subunit E isoform 1b protein_coding Danio_rerio
ENSMUSG00000019210 Atp6v1e1 ATPase, H+ transporting, lysosomal V1 subunit E1 protein_coding Mus_musculus

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