C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131374 TBC1D5 9606 - 3:17157162-18444817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253692 TBC1D5-001 17157162-17740907 protein_coding
  ENST00000412981 TBC1D5-009 17404694-17742601 nonsense_mediated_decay
  ENST00000414318 TBC1D5-003 17160372-18444817 processed_transcript
  ENST00000414349 TBC1D5-029 17404906-17742594 protein_coding
  ENST00000415814 TBC1D5-020 17383974-17742652 protein_coding
  ENST00000423331 TBC1D5-021 17576482-17742612 processed_transcript
  ENST00000425944 TBC1D5-016 17404714-17742615 protein_coding
  ENST00000428355 TBC1D5-019 17404707-17742615 protein_coding
  ENST00000429383 TBC1D5-002 17160372-17742498 protein_coding
  ENST00000429924 TBC1D5-005 17184577-17406720 protein_coding
  ENST00000430169 TBC1D5-010 17404732-17742604 nonsense_mediated_decay
  ENST00000433533 TBC1D5-024 17508481-17702354 protein_coding
  ENST00000434420 TBC1D5-022 17406472-17623916 protein_coding
  ENST00000443386 TBC1D5-014 17406418-17739479 processed_transcript
  ENST00000443499 TBC1D5-012 17404910-17742615 processed_transcript
  ENST00000444471 TBC1D5-023 17508474-17742615 protein_coding
  ENST00000444756 TBC1D5-013 17406418-17742601 processed_transcript
  ENST00000445294 TBC1D5-011 17404747-17742615 protein_coding
  ENST00000446818 TBC1D5-004 17160557-17700020 protein_coding
  ENST00000446863 TBC1D5-018 17406456-17742575 protein_coding
  ENST00000452492 TBC1D5-008 17403201-17742607 nonsense_mediated_decay
  ENST00000465884 TBC1D5-006 17337389-17372134 processed_transcript
  ENST00000471679 TBC1D5-028 17644041-17742739 processed_transcript
  ENST00000473612 TBC1D5-007 17623715-17672675 processed_transcript
  ENST00000480435 TBC1D5-026 17575203-17700014 processed_transcript
  ENST00000481396 TBC1D5-025 17508549-17742644 processed_transcript
  ENST00000485432 TBC1D5-027 17586352-17742748 processed_transcript
  ENST00000486224 TBC1D5-015 17508474-17623913 processed_transcript
  ENST00000497531 TBC1D5-017 17406418-17742564 processed_transcript
  ENST00000507877 TBC1D5-030 17406430-17700006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyLiverLungMuscleOvaryENST00000253692ENST00000429383
Transcript ID Bladder Heart Kidney Liver Lung Muscle Ovary
ENST00000253692 2.757±0.00 4.863±0.00 N/A 3.569±0.00 3.131±0.00 1.420±0.00 4.419±0.00
ENST00000429383 3.603±0.00 N/A 5.257±0.00 N/A 4.678±0.00 N/A 7.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HQ CIL_0004HQ_0001 CGP 3:17157162-18445588

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0030904 IDA retromer complex
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036212 tbc1d5 TBC1 domain family, member 5 protein_coding Danio_rerio
ENSMUSG00000023923 Tbc1d5 TBC1 domain family, member 5 protein_coding Mus_musculus

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