C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: VCP-interacting membrane protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131871 VIMP 9606 - 15:101270817-101277500 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398226 VIMP-001 101270817-101277450 protein_coding
  ENST00000526043 VIMP-003 101272190-101277471 retained_intron
  ENST00000526049 VIMP-002 101272182-101277446 protein_coding
  ENST00000527833 VIMP-008 101274168-101277441 retained_intron
  ENST00000528346 VIMP-006 101272806-101277287 protein_coding
  ENST00000529968 VIMP-009 101275100-101277500 retained_intron
  ENST00000531964 VIMP-005 101271417-101277314 protein_coding
  ENST00000534014 VIMP-004 101276433-101277453 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398226ENST00000526049ENST00000528346ENST00000531964
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.259±0.00 N/A N/A
ENST00000526049 21.126±0.00 32.156±0.00 2.470±0.00 7.387±6.45 22.930±0.00 16.288±8.46 9.888±8.05 25.000±20.30 13.586±9.04 17.099±11.76 11.626±8.80 23.653±10.47 36.621±7.53 40.344±7.97
ENST00000528346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.612±0.00 58.009±0.00 31.074±0.00
ENST00000531964 N/A N/A N/A N/A 2.509±0.00 2.694±0.00 N/A 1.619±0.00 N/A N/A 0.684±0.00 27.095±0.00 10.846±0.00 99.963±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002865 IMP negative regulation of acute inflammatory response to antigenic stimulus
GO:0004872 NAS receptor activity
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005881 IDA cytoplasmic microtubule
GO:0005886 TAS plasma membrane
GO:0006111 TAS regulation of gluconeogenesis
GO:0006886 IEA intracellular protein transport
GO:0006983 IDA ER overload response
GO:0008430 IEA selenium binding
GO:0009749 IEP response to glucose
GO:0016209 IDA antioxidant activity
GO:0019899 IPI enzyme binding
GO:0030176 IDA:IEA integral component of endoplasmic reticulum membrane
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0030968 IDA endoplasmic reticulum unfolded protein response
GO:0030970 IDA retrograde protein transport, ER to cytosol
GO:0032715 ISS negative regulation of interleukin-6 production
GO:0032720 ISS negative regulation of tumor necrosis factor production
GO:0032869 TAS cellular response to insulin stimulus
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034362 IDA low-density lipoprotein particle
GO:0034599 IMP cellular response to oxidative stress
GO:0045184 TAS establishment of protein localization
GO:0045454 IDA cell redox homeostasis
GO:0045719 TAS negative regulation of glycogen biosynthetic process
GO:0046325 TAS negative regulation of glucose import
GO:0050728 IC negative regulation of inflammatory response
GO:0051771 IMP negative regulation of nitric-oxide synthase biosynthetic process
GO:0051775 IDA response to redox state
GO:0071222 IMP cellular response to lipopolysaccharide
GO:0080164 IMP regulation of nitric oxide metabolic process
GO:1902236 IMP negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:2000110 IMP negative regulation of macrophage apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070097 vimp VCP-interacting membrane protein protein_coding Danio_rerio
ENSMUSG00000075701 Vimp VCP-interacting membrane protein protein_coding Mus_musculus

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