C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IQ motif containing with AAA domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132321 IQCA1 9606 - 2:236324147-236507542 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254653 IQCA1-002 236324151-236507532 nonsense_mediated_decay
  ENST00000309507 IQCA1-201 236324147-236507535 protein_coding
  ENST00000409100 IQCA1-009 236324653-236346751 processed_transcript
  ENST00000409907 IQCA1-001 236324151-236507542 protein_coding
  ENST00000418802 IQCA1-005 236377116-236503696 protein_coding
  ENST00000431676 IQCA1-202 236324147-236503697 protein_coding
  ENST00000465621 IQCA1-006 236392329-236455111 processed_transcript
  ENST00000467572 IQCA1-008 236380613-236412891 processed_transcript
  ENST00000479471 IQCA1-007 236324691-236332056 retained_intron
  ENST00000479783 IQCA1-004 236324671-236333363 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254653ENST00000309507ENST00000409100ENST00000409907ENST00000418802ENST00000431676ENST00000467572ENST00000479783
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A
ENST00000309507 N/A N/A N/A 0.486±0.00 N/A 0.066±0.00 0.074±0.00 N/A 0.034±0.00 0.804±0.21 N/A N/A 0.059±0.00 2.596±0.00
ENST00000409100 0.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 0.534±0.31 0.327±0.08 N/A
ENST00000409907 N/A 0.163±0.00 N/A N/A 0.522±0.00 N/A N/A 0.902±0.00 N/A 1.396±0.00 N/A 0.420±0.12 0.103±0.01 0.789±0.00
ENST00000418802 0.122±0.00 N/A N/A N/A 0.082±0.00 0.535±0.00 N/A N/A N/A N/A 0.054±0.00 N/A N/A 1.872±0.89
ENST00000431676 0.082±0.00 N/A 0.327±0.00 N/A N/A 0.126±0.00 N/A 1.185±0.00 N/A N/A N/A N/A 0.030±0.00 N/A
ENST00000467572 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000479783 N/A 0.103±0.00 N/A 0.600±0.00 N/A N/A 0.036±0.00 N/A 0.092±0.00 N/A N/A 0.094±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RK CIL_0007RK_0001 VISTA 2:235753955-236356213
CIL_0008K4 CIL_0008K4_0001 VISTA 2:235862720-236463204
CIL_0007XN CIL_0007XN_0001 VISTA 2:235956423-236557500
CIL_0002YM CIL_0002YM_0001 CGP 2:236194872-236507542
CIL_0008Q8 CIL_0008Q8_0001 VISTA 2:236320043-236922418
CIL_0002W2 CIL_0002W2_0001 CGP 2:236324147-236582358

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057276 iqca1 IQ motif containing with AAA domain 1 protein_coding Danio_rerio
ENSMUSG00000026301 Iqca IQ motif containing with AAA domain protein_coding Mus_musculus

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