C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 52 (riboflavin transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132517 SLC52A1 9606 - 17:5032600-5052009 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254853 SLC52A1-001 5032600-5035426 protein_coding
  ENST00000424747 SLC52A1-201 5032605-5035432 protein_coding
  ENST00000512825 SLC52A1-002 5032603-5052009 protein_coding
  ENST00000573674 SLC52A1-003 5032603-5035424 retained_intron
  ENST00000575919 SLC52A1-004 5032716-5035422 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254853ENST00000424747ENST00000512825ENST00000573674ENST00000575919
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254853 N/A N/A N/A 0.429±0.00 N/A N/A 0.104±0.00 N/A 0.529±0.00 N/A N/A 17.650±6.29 N/A
ENST00000424747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 11.598±0.00 0.162±0.00
ENST00000512825 0.045±0.00 0.185±0.00 0.080±0.00 0.174±0.00 0.043±0.02 0.101±0.00 0.069±0.00 0.060±0.01 0.089±0.07 N/A 0.258±0.32 N/A 0.270±0.00
ENST00000573674 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.335±0.00 0.055±0.00 N/A N/A
ENST00000575919 0.105±0.00 0.329±0.00 0.165±0.00 0.482±0.00 0.100±0.00 0.062±0.02 N/A 0.061±0.00 0.194±0.00 0.017±0.00 N/A 16.574±14.04 0.123±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001618 IEA virus receptor activity
GO:0005887 IDA integral component of plasma membrane
GO:0009615 IEA response to virus
GO:0032217 IDA riboflavin transporter activity
GO:0032218 IDA riboflavin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022560 Slc52a2 solute carrier protein 52, member 2 protein_coding Mus_musculus

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