C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: XIAP associated factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132530 XAF1 9606 + 17:6755447-6775647 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346752 XAF1-002 6755838-6773663 protein_coding
  ENST00000361842 XAF1-001 6755840-6775647 protein_coding
  ENST00000571135 XAF1-018 6756077-6760479 nonsense_mediated_decay
  ENST00000571217 XAF1-005 6756062-6774108 nonsense_mediated_decay
  ENST00000571673 XAF1-007 6756079-6773169 nonsense_mediated_decay
  ENST00000572107 XAF1-010 6756053-6758716 processed_transcript
  ENST00000572495 XAF1-009 6757397-6758592 retained_intron
  ENST00000572546 XAF1-020 6756046-6762193 nonsense_mediated_decay
  ENST00000573518 XAF1-012 6761718-6770780 retained_intron
  ENST00000573760 XAF1-014 6755447-6758632 retained_intron
  ENST00000574394 XAF1-016 6755565-6760581 protein_coding
  ENST00000574907 XAF1-011 6756067-6762206 protein_coding
  ENST00000574962 XAF1-006 6756079-6773169 nonsense_mediated_decay
  ENST00000575147 XAF1-013 6756067-6762025 nonsense_mediated_decay
  ENST00000575267 XAF1-019 6756048-6758175 processed_transcript
  ENST00000575369 XAF1-003 6755448-6771928 nonsense_mediated_decay
  ENST00000576341 XAF1-015 6755451-6758329 retained_intron
  ENST00000576459 XAF1-017 6756046-6759556 processed_transcript
  ENST00000576724 XAF1-021 6756055-6770969 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartMuscleENST00000346752ENST00000571135ENST00000571673ENST00000575369ENST00000576724
Transcript ID Colon Heart Muscle
ENST00000346752 N/A N/A 0.776±0.00
ENST00000571135 N/A N/A 2.809±0.00
ENST00000571673 N/A N/A 1.256±0.00
ENST00000575369 1.540±0.00 0.961±0.00 N/A
ENST00000576724 N/A N/A 0.799±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HE CIL_0000HE_0001 CGP 17:6684713-6775647
CIL_0000HD CIL_0000HD_0001 CGP 17:6755447-6797101

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0031333 IEA negative regulation of protein complex assembly
GO:0035456 IDA response to interferon-beta
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068939 XAF1 XIAP associated factor 1 protein_coding Danio_rerio
ENSMUSG00000040483 Xaf1 XIAP associated factor 1 protein_coding Mus_musculus

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