C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein arginine methyltransferase 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132600 PRMT7 9606 + 16:68310974-68358563 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339507 PRMT7-001 68311134-68358553 protein_coding
  ENST00000441236 PRMT7-201 68315896-68357265 protein_coding
  ENST00000449359 PRMT7-014 68311056-68357259 protein_coding
  ENST00000561806 PRMT7-024 68315880-68329226 retained_intron
  ENST00000562050 PRMT7-009 68311068-68339968 nonsense_mediated_decay
  ENST00000562381 PRMT7-031 68310974-68337571 nonsense_mediated_decay
  ENST00000562456 PRMT7-013 68315951-68324865 retained_intron
  ENST00000563443 PRMT7-016 68324699-68328510 processed_transcript
  ENST00000563520 PRMT7-002 68311070-68339945 processed_transcript
  ENST00000563562 PRMT7-010 68315842-68337525 processed_transcript
  ENST00000563608 PRMT7-032 68352069-68356749 retained_intron
  ENST00000564050 PRMT7-005 68311054-68346280 processed_transcript
  ENST00000564441 PRMT7-020 68311063-68339963 processed_transcript
  ENST00000565356 PRMT7-021 68311064-68352660 retained_intron
  ENST00000565745 PRMT7-019 68311016-68324766 protein_coding
  ENST00000565761 PRMT7-012 68323689-68329159 processed_transcript
  ENST00000565983 PRMT7-004 68311114-68315957 processed_transcript
  ENST00000566341 PRMT7-017 68311050-68337521 nonsense_mediated_decay
  ENST00000566430 PRMT7-007 68315979-68321711 retained_intron
  ENST00000566657 PRMT7-023 68310974-68324790 protein_coding
  ENST00000566687 PRMT7-026 68346121-68348433 retained_intron
  ENST00000566708 PRMT7-011 68348407-68352056 processed_transcript
  ENST00000567542 PRMT7-006 68323983-68358563 retained_intron
  ENST00000568463 PRMT7-028 68354329-68357249 retained_intron
  ENST00000568975 PRMT7-003 68315195-68357259 nonsense_mediated_decay
  ENST00000569047 PRMT7-030 68311056-68339326 protein_coding
  ENST00000569571 PRMT7-027 68311040-68339486 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339507ENST00000441236ENST00000449359ENST00000561806ENST00000562456ENST00000564050ENST00000565356ENST00000565761ENST00000566341ENST00000566657ENST00000566687ENST00000567542ENST00000568463ENST00000568975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339507 N/A N/A 0.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441236 4.898±0.00 5.194±0.00 N/A 4.190±1.49 10.274±0.00 3.688±0.00 3.247±2.59 7.313±0.00 1.612±0.00 N/A 4.974±3.87 8.816±3.15 11.023±2.76 9.236±0.21
ENST00000449359 2.503±0.00 5.617±0.00 N/A N/A N/A 2.779±0.00 N/A 1.096±0.00 1.203±0.00 2.905±0.00 1.448±0.00 N/A N/A N/A
ENST00000561806 N/A N/A N/A N/A N/A N/A N/A N/A 4.732±0.00 N/A 5.051±0.00 6.292±0.00 N/A N/A
ENST00000562456 N/A N/A 2.847±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564050 N/A N/A N/A N/A N/A N/A 1.483±0.00 N/A N/A N/A 12.423±0.00 N/A N/A N/A
ENST00000565356 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.879±0.00 N/A 2.411±0.00 N/A N/A
ENST00000565761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.371±0.00 N/A N/A
ENST00000566341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.752±0.00 N/A
ENST00000566657 N/A N/A N/A N/A N/A N/A 3.404±0.00 4.566±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.760±0.00 N/A N/A N/A
ENST00000567542 N/A N/A N/A N/A N/A N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A
ENST00000568463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.021±0.00 N/A N/A
ENST00000568975 N/A N/A N/A N/A N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CE CIL_0000CE_0001 CGP 16:68284503-68358563
CIL_0000C5 CIL_0000C5_0001 CGP 16:68310974-68448688

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000387 IMP spliceosomal snRNP assembly
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006349 ISS regulation of gene expression by genetic imprinting
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0006479 IEA protein methylation
GO:0008168 IEA methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0008469 IDA histone-arginine N-methyltransferase activity
GO:0008757 IDA S-adenosylmethionine-dependent methyltransferase activity
GO:0016277 IDA [myelin basic protein]-arginine N-methyltransferase activity
GO:0016571 IDA histone methylation
GO:0018216 IDA peptidyl-arginine methylation
GO:0019918 IDA peptidyl-arginine methylation, to symmetrical-dimethyl arginine
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0030154 IEA cell differentiation
GO:0034969 ISS histone arginine methylation
GO:0035241 IDA protein-arginine omega-N monomethyltransferase activity
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity
GO:0035243 IDA protein-arginine omega-N symmetric methyltransferase activity
GO:0042393 IC histone binding
GO:0043021 IPI ribonucleoprotein complex binding
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0043393 IC regulation of protein binding
GO:0043985 IEA histone H4-R3 methylation
GO:0044020 ISS histone methyltransferase activity (H4-R3 specific)

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051902 prmt7 protein arginine N-methyltransferase 7 protein_coding Danio_rerio
ENSMUSG00000060098 Prmt7 protein arginine N-methyltransferase 7 protein_coding Mus_musculus

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