C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NIP7, nucleolar pre-rRNA processing protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132603 NIP7 9606 + 16:69339430-69343111 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254940 NIP7-001 69339430-69343111 protein_coding
  ENST00000254941 NIP7-002 69339797-69343104 protein_coding
  ENST00000562131 NIP7-008 69339993-69340665 retained_intron
  ENST00000562523 NIP7-005 69340276-69342072 protein_coding
  ENST00000563364 NIP7-006 69339927-69341310 retained_intron
  ENST00000565034 NIP7-003 69339830-69341435 retained_intron
  ENST00000567202 NIP7-004 69340271-69342054 protein_coding
  ENST00000569637 NIP7-007 69339568-69340887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000254940
Transcript ID Kidney
ENST00000254940 4.813±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IB CIL_0004IB_0001 CGP 16:69339430-69351809

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0042255 IEA ribosome assembly
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059075 nip7 nuclear import 7 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000031917 Nip7 nuclear import 7 homolog (S. cerevisiae) protein_coding Mus_musculus

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