C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: store-operated calcium entry-associated regulatory factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133872 SARAF 9606 - 8:30063012-30083208 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256255 SARAF-001 30063012-30083207 protein_coding
  ENST00000517569 SARAF-010 30073694-30082971 retained_intron
  ENST00000518174 SARAF-002 30063098-30083124 nonsense_mediated_decay
  ENST00000518296 SARAF-006 30065712-30069949 protein_coding
  ENST00000518340 SARAF-008 30063853-30082965 nonsense_mediated_decay
  ENST00000520303 SARAF-003 30063130-30083153 nonsense_mediated_decay
  ENST00000521083 SARAF-013 30073879-30083043 processed_transcript
  ENST00000521265 SARAF-004 30063126-30082948 protein_coding
  ENST00000521934 SARAF-007 30065874-30067053 retained_intron
  ENST00000522055 SARAF-011 30069793-30083064 nonsense_mediated_decay
  ENST00000522794 SARAF-009 30066904-30082424 protein_coding
  ENST00000523127 SARAF-014 30063795-30070035 protein_coding
  ENST00000523761 SARAF-012 30069874-30083074 protein_coding
  ENST00000545648 SARAF-201 30063012-30083208 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256255ENST00000518174ENST00000520303ENST00000521265ENST00000522055ENST00000522794ENST00000523127ENST00000523761ENST00000545648
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256255 N/A N/A 3.727±0.00 55.878±6.40 12.611±0.86 19.605±0.68 7.457±0.59 15.713±2.05 21.431±5.86 16.621±0.37 2.494±0.00 15.596±8.43 32.838±0.00 14.636±0.00
ENST00000518174 50.516±0.00 34.166±0.00 N/A 60.515±19.46 40.103±0.00 53.119±0.00 28.573±0.00 46.403±26.57 N/A 41.695±25.85 8.192±0.00 95.473±13.69 75.581±17.19 42.898±0.00
ENST00000520303 N/A N/A N/A N/A N/A N/A 6.768±0.00 29.614±0.00 N/A 21.007±0.00 8.509±0.00 46.058±7.04 52.455±23.99 67.818±0.00
ENST00000521265 N/A N/A 2.175±0.00 N/A N/A N/A 7.316±0.00 N/A N/A 21.826±0.00 6.425±0.00 5.344±0.00 53.571±1.76 N/A
ENST00000522055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.882±0.00 165.979±0.00 127.222±0.00
ENST00000522794 N/A N/A 6.026±0.00 N/A 26.586±0.00 N/A 9.086±0.00 N/A 17.874±0.00 N/A 5.272±0.00 N/A N/A N/A
ENST00000523127 N/A N/A 14.177±0.00 65.383±0.00 17.947±0.00 N/A 17.659±2.69 37.667±0.00 25.933±0.00 38.744±0.00 8.038±1.04 32.393±9.01 84.213±14.86 98.258±0.00
ENST00000523761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 91.108±0.00 394.058±0.00 216.802±0.00
ENST00000545648 29.810±0.00 51.370±0.00 N/A 82.026±0.00 20.896±0.00 45.813±0.00 N/A N/A N/A N/A N/A 25.589±0.00 N/A 47.993±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0001 VISTA 8:29977526-30581393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006816 IEA calcium ion transport
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:2001256 IDA regulation of store-operated calcium entry

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070452 tmem66 transmembrane protein 66 protein_coding Danio_rerio
ENSMUSG00000031532 Tmem66 store-operated calcium entry-associated regulatory factor protein_coding Mus_musculus

Loading