C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: katanin p80 subunit B-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134152 KATNBL1 9606 - 15:34140674-34210096 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256544 KATNBL1-001 34140674-34210079 protein_coding
  ENST00000540594 KATNBL1-003 34146660-34210096 retained_intron
  ENST00000557877 KATNBL1-017 34148653-34210011 protein_coding
  ENST00000558473 KATNBL1-010 34148543-34154831 retained_intron
  ENST00000558681 KATNBL1-013 34142091-34145855 retained_intron
  ENST00000559462 KATNBL1-005 34148656-34210096 protein_coding
  ENST00000559464 KATNBL1-016 34163560-34199840 protein_coding
  ENST00000559515 KATNBL1-006 34153005-34210077 protein_coding
  ENST00000559760 KATNBL1-014 34144964-34148750 protein_coding
  ENST00000560108 KATNBL1-007 34148658-34210079 protein_coding
  ENST00000560247 KATNBL1-002 34146070-34210096 retained_intron
  ENST00000560308 KATNBL1-009 34147203-34154831 retained_intron
  ENST00000560310 KATNBL1-008 34147230-34154831 protein_coding
  ENST00000560671 KATNBL1-004 34148390-34210061 retained_intron
  ENST00000560915 KATNBL1-015 34208517-34210069 processed_transcript
  ENST00000561270 KATNBL1-011 34141962-34153050 protein_coding
  ENST00000561371 KATNBL1-012 34142669-34147214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256544ENST00000557877ENST00000559760ENST00000560108ENST00000560247ENST00000560310ENST00000560671ENST00000560915ENST00000561270ENST00000561371
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256544 N/A N/A 0.637±0.02 1.121±0.18 1.896±0.00 1.341±0.00 N/A 0.386±0.00 0.457±0.00 N/A 2.011±0.34 2.156±0.50 2.309±0.58
ENST00000557877 N/A 0.870±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559760 N/A N/A N/A 2.430±0.00 N/A 0.824±0.00 N/A N/A 3.647±0.00 N/A N/A 6.847±0.00 5.808±0.00
ENST00000560108 N/A N/A N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560247 N/A N/A 1.020±0.00 1.259±0.00 1.297±0.00 0.336±0.00 1.443±0.00 N/A 1.673±0.00 0.403±0.00 N/A N/A N/A
ENST00000560310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.796±0.00 N/A N/A
ENST00000560671 N/A N/A N/A N/A N/A N/A N/A N/A 3.309±0.00 N/A N/A N/A N/A
ENST00000560915 N/A N/A N/A N/A N/A N/A 0.689±0.00 N/A N/A N/A N/A N/A N/A
ENST00000561270 3.595±0.00 N/A N/A 4.193±0.00 2.408±0.00 2.498±0.00 3.331±0.00 1.424±0.00 2.619±0.00 0.262±0.17 3.321±0.00 4.272±0.29 4.713±0.00
ENST00000561371 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.960±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042522 katnbl1 katanin p80 subunit B-like 1 protein_coding Danio_rerio
ENSMUSG00000027132 Katnbl1 katanin p80 subunit B like 1 protein_coding Mus_musculus

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