C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: asparaginyl-tRNA synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134440 NARS 9606 - 18:57600656-57622213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256854 NARS-001 57600656-57622173 protein_coding
  ENST00000411676 NARS-002 57607156-57621808 retained_intron
  ENST00000540592 NARS-003 57607202-57621792 nonsense_mediated_decay
  ENST00000586807 NARS-004 57601350-57621785 nonsense_mediated_decay
  ENST00000587194 NARS-008 57609378-57621792 protein_coding
  ENST00000587366 NARS-012 57613653-57621776 retained_intron
  ENST00000587675 NARS-005 57607656-57622213 protein_coding
  ENST00000588661 NARS-006 57607656-57621824 protein_coding
  ENST00000589001 NARS-011 57605934-57607190 retained_intron
  ENST00000589314 NARS-010 57601343-57605862 retained_intron
  ENST00000590123 NARS-009 57613624-57621737 nonsense_mediated_decay
  ENST00000591599 NARS-007 57607654-57621800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256854ENST00000586807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256854 17.597±0.00 26.577±0.00 4.583±0.00 31.420±11.60 19.031±6.80 19.014±9.31 12.784±8.39 34.178±28.65 8.325±0.40 10.175±1.46 9.651±3.72 18.307±10.82 19.309±5.69 17.825±7.28
ENST00000586807 7.078±0.00 N/A 3.632±0.00 8.543±0.00 N/A 6.326±0.00 6.031±2.66 1.971±0.00 4.328±0.00 2.906±0.00 6.740±3.08 35.669±0.00 34.658±0.00 26.791±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O9 CIL_0006O9_0001 CGP 18:57548283-57622213
CIL_0006OE CIL_0006OE_0001 CGP 18:57600656-57803101

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004815 IEA aspartate-tRNA ligase activity
GO:0004816 IEA asparagine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006421 IEA asparaginyl-tRNA aminoacylation
GO:0006422 IEA aspartyl-tRNA aminoacylation
GO:0010467 TAS gene expression
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061100 nars asparaginyl-tRNA synthetase protein_coding Danio_rerio
ENSMUSG00000024587 Nars asparaginyl-tRNA synthetase protein_coding Mus_musculus

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