C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polyhomeotic homolog 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134686 PHC2 9606 - 1:33323623-33431052 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257118 PHC2-001 33323626-33375593 protein_coding
  ENST00000373418 PHC2-003 33323626-33349885 protein_coding
  ENST00000373422 PHC2-002 33323626-33355209 protein_coding
  ENST00000431992 PHC2-201 33323623-33375593 protein_coding
  ENST00000459964 PHC2-009 33353213-33354903 processed_transcript
  ENST00000467894 PHC2-006 33324689-33349884 processed_transcript
  ENST00000468406 PHC2-010 33368570-33392765 processed_transcript
  ENST00000473158 PHC2-008 33331364-33335256 processed_transcript
  ENST00000484692 PHC2-011 33372326-33431052 processed_transcript
  ENST00000485928 PHC2-004 33323626-33349811 processed_transcript
  ENST00000486897 PHC2-005 33330071-33349650 processed_transcript
  ENST00000493483 PHC2-007 33330071-33349772 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257118ENST00000373418ENST00000373422ENST00000467894ENST00000473158ENST00000485928
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257118 N/A N/A 0.657±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.931±0.61
ENST00000373418 43.500±0.00 34.601±0.00 11.086±9.77 12.818±11.79 17.826±16.08 16.871±15.65 86.926±0.00 20.596±19.94 100.577±0.00 49.582±45.91 26.300±16.95 39.917±22.22 30.448±11.39
ENST00000373422 N/A N/A N/A N/A N/A 0.664±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467894 N/A N/A N/A N/A 2.650±0.00 N/A N/A 3.019±0.00 N/A N/A 2.436±0.00 N/A N/A
ENST00000473158 N/A N/A N/A 5.637±0.00 N/A N/A N/A 4.429±0.00 N/A N/A N/A N/A N/A
ENST00000485928 N/A N/A N/A N/A N/A N/A N/A 7.048±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0001 VISTA 1:32956893-33558359
CIL_0008F1 CIL_0008F1_0001 VISTA 1:33063188-33665346

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000792 IEA heterochromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0031519 IDA PcG protein complex
GO:0035102 IDA PRC1 complex
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013224 phc2b polyhomeotic-like 2b protein_coding Danio_rerio
ENSDARG00000056695 phc2a polyhomeotic-like 2a (Drosophila) protein_coding Danio_rerio
ENSMUSG00000028796 Phc2 polyhomeotic-like 2 (Drosophila) protein_coding Mus_musculus

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