C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134873 CLDN10 9606 + 13:95433604-95579759 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299339 CLDN10-002 95552725-95578247 protein_coding
  ENST00000376855 CLDN10-003 95560150-95560938 protein_coding
  ENST00000376873 CLDN10-001 95433604-95579759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverLungOvaryENST00000299339
Transcript ID Bladder Brain Kidney Liver Lung Ovary
ENST00000299339 11.422±0.00 17.479±6.12 47.204±0.00 1.149±0.00 6.126±0.00 3.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F4 CIL_0002F4_0001 CGP 13:95019829-95579759
CIL_0000O1 CIL_0000O1_0001 CGP 13:95433604-95644703

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005923 IEA:ISS tight junction
GO:0006811 IEA ion transport
GO:0007155 TAS cell adhesion
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005377 cldn10b claudin 10b protein_coding Danio_rerio
ENSDARG00000058937 cldn10a claudin 10a protein_coding Danio_rerio
ENSMUSG00000022132 Cldn10 claudin 10 protein_coding Mus_musculus

Loading