C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basic, immunoglobulin-like variable motif containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134897 BIVM 9606 + 13:102799049-102841535 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257336 BIVM-002 102799049-102841533 protein_coding
  ENST00000448849 BIVM-201 102799049-102841535 protein_coding
  ENST00000474443 BIVM-001 102807544-102816874 processed_transcript
  ENST00000481069 BIVM-005 102801494-102807323 processed_transcript
  ENST00000490317 BIVM-003 102820387-102840163 retained_intron
  ENST00000491929 BIVM-004 102800401-102807400 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257336ENST00000448849ENST00000490317
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257336 2.255±0.00 1.970±0.15 2.538±0.00 2.045±0.16 3.075±0.00 5.166±0.00 1.993±0.75 3.467±0.00 1.830±0.00 2.878±0.79 1.716±0.01 2.806±0.00
ENST00000448849 N/A 1.669±0.00 N/A 1.921±0.00 N/A 2.751±0.00 1.186±0.00 N/A N/A 3.784±0.00 1.099±0.00 N/A
ENST00000490317 3.872±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WG CIL_0000WG_0001 CGP 13:102784281-102841535
CIL_0000WF CIL_0000WF_0001 CGP 13:102799049-102872398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061409 bivm basic, immunoglobulin-like variable motif containing protein_coding Danio_rerio
ENSMUSG00000041684 Bivm basic, immunoglobulin-like variable motif containing protein_coding Mus_musculus

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