C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteinyl-tRNA synthetase 2, mitochondrial (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134905 CARS2 9606 - 13:110641412-110713603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257347 CARS2-001 110641417-110706157 protein_coding
  ENST00000375781 CARS2-011 110641417-110663775 retained_intron
  ENST00000465145 CARS2-007 110667436-110706469 processed_transcript
  ENST00000471986 CARS2-006 110642387-110646073 processed_transcript
  ENST00000480437 CARS2-005 110642447-110646278 processed_transcript
  ENST00000481787 CARS2-009 110641443-110683139 retained_intron
  ENST00000485188 CARS2-008 110705521-110713535 processed_transcript
  ENST00000487253 CARS2-030 110641587-110663518 nonsense_mediated_decay
  ENST00000535398 CARS2-014 110643956-110713603 processed_transcript
  ENST00000535516 CARS2-012 110641419-110663530 retained_intron
  ENST00000535615 CARS2-028 110642511-110665730 retained_intron
  ENST00000537386 CARS2-025 110646679-110663628 retained_intron
  ENST00000537394 CARS2-020 110687732-110706133 nonsense_mediated_decay
  ENST00000537404 CARS2-029 110646861-110651207 retained_intron
  ENST00000537412 CARS2-015 110701502-110713601 processed_transcript
  ENST00000537743 CARS2-033 110662838-110677024 protein_coding
  ENST00000537802 CARS2-003 110641419-110665750 retained_intron
  ENST00000539269 CARS2-021 110676974-110706053 nonsense_mediated_decay
  ENST00000539405 CARS2-026 110650247-110667458 retained_intron
  ENST00000540006 CARS2-010 110641412-110663861 retained_intron
  ENST00000540215 CARS2-031 110644387-110646376 retained_intron
  ENST00000540629 CARS2-018 110687792-110712486 processed_transcript
  ENST00000540785 CARS2-023 110701351-110705616 retained_intron
  ENST00000541239 CARS2-013 110641412-110645633 retained_intron
  ENST00000541362 CARS2-027 110646467-110665737 retained_intron
  ENST00000541443 CARS2-019 110677096-110706505 processed_transcript
  ENST00000542126 CARS2-017 110687721-110713522 processed_transcript
  ENST00000542709 CARS2-022 110687722-110705797 protein_coding
  ENST00000542774 CARS2-002 110641584-110644681 processed_transcript
  ENST00000543487 CARS2-034 110645930-110678093 processed_transcript
  ENST00000544488 CARS2-016 110676999-110713522 processed_transcript
  ENST00000545506 CARS2-024 110646851-110665791 retained_intron
  ENST00000620794 CARS2-035 110643753-110647115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257347ENST00000375781ENST00000481787ENST00000537802ENST00000541239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257347 8.101±0.00 14.583±0.00 1.242±0.00 2.979±1.53 11.149±5.89 9.095±5.34 7.145±5.72 11.014±0.00 7.059±2.02 8.017±0.00 8.627±3.12 15.157±5.08 10.792±1.51 18.552±0.00
ENST00000375781 N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481787 N/A N/A 4.455±0.00 2.558±0.00 N/A N/A 1.374±0.00 5.146±2.25 5.641±0.00 4.282±0.00 4.072±0.00 20.747±6.31 10.295±3.67 27.510±0.00
ENST00000537802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.221±0.00 N/A N/A
ENST00000541239 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.366±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JQ CIL_0001JQ_0001 CGP 13:110615460-110713603
CIL_00077R CIL_00077R_0001 CGP 13:110641412-110723339

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004817 IBA:IEA cysteine-tRNA ligase activity
GO:0004824 IEA lysine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 IBA cytosol
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006423 IBA:IEA cysteinyl-tRNA aminoacylation
GO:0006430 IEA lysyl-tRNA aminoacylation
GO:0010467 TAS gene expression
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078546 cars2 cysteinyl-tRNA synthetase 2, mitochondrial protein_coding Danio_rerio
ENSMUSG00000056228 Cars2 cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) protein_coding Mus_musculus

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