C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: patatin-like phospholipase domain containing 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135241 PNPLA8 9606 - 7:108470422-108569666 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257694 PNPLA8-001 108471555-108526194 protein_coding
  ENST00000415498 PNPLA8-007 108515327-108527935 protein_coding
  ENST00000422087 PNPLA8-002 108471627-108526194 protein_coding
  ENST00000426128 PNPLA8-006 108470422-108526071 protein_coding
  ENST00000427008 PNPLA8-009 108514914-108526123 protein_coding
  ENST00000436062 PNPLA8-003 108471661-108526318 protein_coding
  ENST00000453085 PNPLA8-005 108472531-108528161 protein_coding
  ENST00000453144 PNPLA8-004 108471627-108526315 protein_coding
  ENST00000462466 PNPLA8-012 108496592-108502788 retained_intron
  ENST00000476592 PNPLA8-011 108496585-108526120 processed_transcript
  ENST00000483879 PNPLA8-010 108496427-108526163 processed_transcript
  ENST00000489738 PNPLA8-008 108497481-108569666 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257694ENST00000422087ENST00000436062ENST00000453085ENST00000453144
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257694 N/A N/A N/A 3.919±0.00 N/A N/A N/A N/A N/A N/A 2.379±0.00 3.808±0.84 N/A
ENST00000422087 N/A N/A N/A N/A N/A N/A 3.456±0.00 N/A N/A N/A N/A N/A N/A
ENST00000436062 2.981±0.00 N/A 4.162±0.00 2.372±0.00 3.014±0.00 3.201±0.55 N/A 3.370±0.00 4.019±0.00 N/A 4.522±0.37 9.709±0.00 6.347±0.00
ENST00000453085 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A
ENST00000453144 N/A 1.944±0.00 5.008±1.05 3.205±0.00 6.959±0.00 4.683±0.00 N/A 4.082±0.00 9.734±0.00 N/A 4.354±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PF CIL_0008PF_0001 VISTA 7:108074195-108676805
CIL_0008CE CIL_0008CE_0001 VISTA 7:108074285-108676732

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001516 IDA prostaglandin biosynthetic process
GO:0004622 IEA lysophospholipase activity
GO:0005488 IEA binding
GO:0005524 NAS ATP binding
GO:0005622 IDA intracellular
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006629 IEA lipid metabolic process
GO:0006631 IDA fatty acid metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0008152 IEA metabolic process
GO:0008219 IDA cell death
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019369 IDA arachidonic acid metabolic process
GO:0034638 IDA phosphatidylcholine catabolic process
GO:0036151 TAS phosphatidylcholine acyl-chain remodeling
GO:0036152 TAS phosphatidylethanolamine acyl-chain remodeling
GO:0043651 IDA linoleic acid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046338 IDA phosphatidylethanolamine catabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0047499 IDA calcium-independent phospholipase A2 activity
GO:0050482 IDA arachidonic acid secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078745 pnpla8 patatin-like phospholipase domain containing 8 protein_coding Danio_rerio
ENSMUSG00000036257 Pnpla8 patatin-like phospholipase domain containing 8 protein_coding Mus_musculus

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