C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: advillin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135407 AVIL 9606 - 12:57797376-57818704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257861 AVIL-001 57797882-57816471 protein_coding
  ENST00000546952 AVIL-007 57797376-57800653 retained_intron
  ENST00000548843 AVIL-003 57806138-57814226 retained_intron
  ENST00000549548 AVIL-004 57805856-57809179 retained_intron
  ENST00000549753 AVIL-009 57806132-57807641 retained_intron
  ENST00000549851 AVIL-002 57797740-57816058 nonsense_mediated_decay
  ENST00000549994 AVIL-008 57810901-57818704 protein_coding
  ENST00000550083 AVIL-010 57803296-57806489 processed_transcript
  ENST00000550537 AVIL-006 57802183-57808692 retained_intron
  ENST00000551248 AVIL-011 57797778-57801417 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLungMuscleENST00000546952ENST00000548843
Transcript ID Colon Heart Kidney Lung Muscle
ENST00000546952 N/A 0.824±0.00 1.530±0.00 N/A 1.312±0.00
ENST00000548843 2.737±0.00 N/A N/A 1.177±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA:ISS actin binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007010 IEA cytoskeleton organization
GO:0007399 TAS nervous system development
GO:0010976 ISS positive regulation of neuron projection development
GO:0015629 TAS actin cytoskeleton
GO:0042995 ISS cell projection
GO:0043005 ISS neuron projection
GO:0051693 IEA actin filament capping
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059342 avil advillin protein_coding Danio_rerio
ENSMUSG00000025432 Avil advillin protein_coding Mus_musculus

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