C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetraspanin 31
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135452 TSPAN31 9606 + 12:57738013-57750211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257910 TSPAN31-001 57744881-57748232 protein_coding
  ENST00000546922 TSPAN31-015 57746667-57747855 retained_intron
  ENST00000546993 TSPAN31-003 57745058-57748205 retained_intron
  ENST00000547311 TSPAN31-014 57739736-57746210 processed_transcript
  ENST00000547472 TSPAN31-011 57745066-57747292 protein_coding
  ENST00000547992 TSPAN31-002 57745023-57750211 protein_coding
  ENST00000548093 TSPAN31-009 57745069-57746394 processed_transcript
  ENST00000548167 TSPAN31-007 57745382-57747066 protein_coding
  ENST00000549052 TSPAN31-010 57745050-57747656 nonsense_mediated_decay
  ENST00000550528 TSPAN31-012 57739866-57746436 processed_transcript
  ENST00000550791 TSPAN31-004 57745457-57748218 retained_intron
  ENST00000552816 TSPAN31-006 57745039-57747025 protein_coding
  ENST00000553089 TSPAN31-008 57745039-57747178 nonsense_mediated_decay
  ENST00000553221 TSPAN31-013 57738013-57747062 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000546922ENST00000549052
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000546922 N/A N/A N/A N/A N/A 7.443±0.00 N/A N/A N/A N/A 18.427±0.00 N/A
ENST00000549052 20.457±0.00 7.220±0.00 22.692±8.08 21.302±0.00 10.279±4.94 16.641±6.69 7.580±2.63 16.248±8.65 12.057±0.00 33.459±0.00 20.666±0.00 19.562±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KQ CIL_0002KQ_0002 CGP 12:57723761-57750211

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 TAS integral component of plasma membrane
GO:0008284 TAS positive regulation of cell proliferation
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074554 sas sarcoma amplified sequence protein_coding Danio_rerio
ENSMUSG00000006736 Tspan31 tetraspanin 31 protein_coding Mus_musculus

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