C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135480 KRT7 9606 + 12:52232520-52252186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331817 KRT7-001 52233114-52248921 protein_coding
  ENST00000546666 KRT7-013 52232665-52233440 processed_transcript
  ENST00000546856 KRT7-006 52238719-52243541 processed_transcript
  ENST00000547613 KRT7-005 52233592-52241508 processed_transcript
  ENST00000548088 KRT7-003 52238688-52241971 retained_intron
  ENST00000548657 KRT7-011 52245439-52252186 processed_transcript
  ENST00000549127 KRT7-018 52243085-52248688 processed_transcript
  ENST00000549638 KRT7-010 52247918-52248925 retained_intron
  ENST00000550153 KRT7-009 52247658-52248921 processed_transcript
  ENST00000551130 KRT7-004 52241545-52243411 retained_intron
  ENST00000552183 KRT7-007 52241528-52244577 processed_transcript
  ENST00000552322 KRT7-008 52244378-52248855 processed_transcript
  ENST00000552400 KRT7-012 52232520-52233148 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331817ENST00000546666ENST00000546856ENST00000548657ENST00000549127ENST00000550153ENST00000552183ENST00000552322
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331817 1.069±0.00 0.305±0.00 2.949±0.00 0.050±0.00 40.395±38.43 0.502±0.19 0.222±0.07 56.938±55.78 4.277±0.00 137.012±128.57 0.157±0.00 25.079±23.07 681.743±191.77 5.042±0.00
ENST00000546666 N/A N/A N/A N/A N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000546856 N/A 0.482±0.00 N/A N/A N/A N/A 0.402±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000548657 N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549127 N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A
ENST00000550153 N/A N/A N/A N/A N/A 1.064±0.00 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000552183 N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000552322 N/A N/A N/A N/A N/A N/A 0.284±0.00 1.229±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0001 CGP 12:52168996-52252186
CIL_00033Q CIL_00033Q_0004 CGP 12:52232520-52309163

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005882 NAS:IEA intermediate filament
GO:0016032 IEA viral process
GO:0045095 IEA keratin filament
GO:0046417 IEA chorismate metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio
ENSMUSG00000023039 Krt7 keratin 7 protein_coding Mus_musculus

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