C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD164 molecule, sialomucin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135535 CD164 9606 - 6:109366514-109382559 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275080 CD164-004 109366518-109382444 protein_coding
  ENST00000310786 CD164-003 109366518-109382444 protein_coding
  ENST00000324953 CD164-002 109366518-109382444 protein_coding
  ENST00000368961 CD164-201 109366516-109382559 protein_coding
  ENST00000413644 CD164-001 109366514-109382457 protein_coding
  ENST00000415861 CD164-008 109366514-109372869 retained_intron
  ENST00000499860 CD164-006 109367279-109380516 retained_intron
  ENST00000504373 CD164-005 109368065-109381700 protein_coding
  ENST00000506649 CD164-011 109368684-109381901 processed_transcript
  ENST00000512212 CD164-012 109375887-109382411 retained_intron
  ENST00000512821 CD164-007 109367821-109382410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275080ENST00000310786ENST00000324953ENST00000368961ENST00000413644ENST00000415861ENST00000512212
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275080 N/A N/A 4.543±0.00 N/A N/A N/A N/A N/A N/A 12.680±0.00 N/A N/A N/A N/A
ENST00000310786 26.463±0.00 8.579±0.00 10.202±0.00 6.251±0.86 61.409±36.20 38.405±5.77 31.309±0.00 41.978±0.00 23.504±5.17 21.475±5.20 13.860±6.40 31.220±12.82 35.271±14.30 16.416±6.87
ENST00000324953 8.271±0.00 13.332±0.00 N/A 2.336±0.00 18.739±0.00 9.518±0.00 N/A 15.724±0.00 8.275±0.00 12.397±0.00 N/A 19.247±0.00 12.843±0.00 20.231±0.00
ENST00000368961 7.742±0.00 4.654±0.00 13.128±0.00 9.453±2.12 29.613±0.00 9.286±0.00 9.946±0.00 38.070±0.00 19.173±0.00 15.401±0.00 N/A 35.356±9.61 12.050±0.00 13.445±2.21
ENST00000413644 8.562±0.00 11.477±0.00 N/A 3.565±0.00 45.455±0.00 19.900±0.00 N/A 33.867±0.00 13.084±0.00 28.094±0.00 9.074±0.00 94.480±94.61 37.745±13.47 26.426±3.83
ENST00000415861 N/A N/A 2.551±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.572±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005764 IDA lysosome
GO:0005768 IDA endosome
GO:0005886 IDA plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006955 TAS immune response
GO:0007155 IDA cell adhesion
GO:0007157 IDA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007162 NAS negative regulation of cell adhesion
GO:0007165 TAS signal transduction
GO:0007275 TAS multicellular organismal development
GO:0007517 IEA muscle organ development
GO:0008285 NAS negative regulation of cell proliferation
GO:0030097 NAS hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013628 cd164 CD164 molecule, sialomucin protein_coding Danio_rerio
ENSMUSG00000019818 Cd164 CD164 antigen protein_coding Mus_musculus

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