C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pecanex-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135749 PCNXL2 9606 - 1:232983435-233295713 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258229 PCNXL2-002 232983435-233295713 protein_coding
  ENST00000324142 PCNXL2-003 233201492-233252687 retained_intron
  ENST00000344698 PCNXL2-001 232984136-233058518 protein_coding
  ENST00000429988 PCNXL2-023 233025263-233054689 retained_intron
  ENST00000430153 PCNXL2-201 233135013-233258152 protein_coding
  ENST00000462233 PCNXL2-007 232984136-233200191 nonsense_mediated_decay
  ENST00000462762 PCNXL2-016 232984137-232985552 processed_transcript
  ENST00000467336 PCNXL2-008 233139809-233180996 processed_transcript
  ENST00000475463 PCNXL2-005 233065461-233258152 nonsense_mediated_decay
  ENST00000484041 PCNXL2-013 233089851-233135188 retained_intron
  ENST00000484347 PCNXL2-011 233095406-233160307 protein_coding
  ENST00000486012 PCNXL2-012 233095657-233177835 nonsense_mediated_decay
  ENST00000488780 PCNXL2-010 233134784-233218087 protein_coding
  ENST00000490102 PCNXL2-022 233090162-233139836 nonsense_mediated_decay
  ENST00000496510 PCNXL2-020 233139826-233181102 processed_transcript
  ENST00000496675 PCNXL2-015 232984135-232985884 processed_transcript
  ENST00000497623 PCNXL2-014 232998323-232999627 retained_intron
  ENST00000498302 PCNXL2-009 233160247-233179174 retained_intron
  ENST00000517808 PCNXL2-018 233199020-233218089 nonsense_mediated_decay
  ENST00000518351 PCNXL2-019 233198967-233227269 protein_coding
  ENST00000519530 PCNXL2-017 233208659-233227347 retained_intron
  ENST00000520463 PCNXL2-021 233125904-233160425 processed_transcript
  ENST00000522067 PCNXL2-024 233017073-233025632 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungOvaryTestisENST00000258229ENST00000344698
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Ovary Testis
ENST00000258229 0.901±0.00 1.393±0.00 0.664±0.00 5.176±2.12 1.082±0.00 1.100±0.00 1.138±0.00 0.941±0.00 3.146±1.18 1.523±0.00
ENST00000344698 N/A N/A N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003R CIL_00003R_0001 CGP 1:232804892-232983882
CIL_0001OO CIL_0001OO_0001 CGP 1:232950605-233295713
CIL_0006KA CIL_0006KA_0001 CGP 1:232983435-233385148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055698 pcnxl2 pecanex-like 2 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000060212 Pcnxl2 pecanex-like 2 (Drosophila) protein_coding Mus_musculus

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