C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: REV1, polymerase (DNA directed)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135945 REV1 9606 - 2:99400475-99490035 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258428 REV1-001 99400475-99490035 protein_coding
  ENST00000393445 REV1-002 99400475-99489973 protein_coding
  ENST00000413697 REV1-003 99400950-99490035 nonsense_mediated_decay
  ENST00000438366 REV1-012 99405928-99410850 nonsense_mediated_decay
  ENST00000450415 REV1-007 99424781-99438727 protein_coding
  ENST00000465086 REV1-016 99402530-99403430 retained_intron
  ENST00000465835 REV1-005 99403056-99451480 processed_transcript
  ENST00000472000 REV1-014 99405933-99406928 retained_intron
  ENST00000473819 REV1-004 99438574-99462788 retained_intron
  ENST00000477121 REV1-013 99406084-99408403 retained_intron
  ENST00000481719 REV1-010 99418832-99424634 retained_intron
  ENST00000482595 REV1-011 99402259-99412953 processed_transcript
  ENST00000482887 REV1-006 99435837-99438777 processed_transcript
  ENST00000485487 REV1-015 99403040-99406353 retained_intron
  ENST00000486117 REV1-009 99431801-99438817 processed_transcript
  ENST00000491752 REV1-008 99435475-99438680 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000258428ENST00000393445ENST00000413697ENST00000465835
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000258428 N/A 3.302±0.67 N/A N/A 1.995±0.00 1.709±0.00 N/A 3.414±0.00 N/A 6.539±0.00 2.167±0.00
ENST00000393445 N/A N/A 3.902±0.00 4.393±0.00 1.306±0.00 N/A 4.165±0.00 3.981±0.62 2.646±0.00 4.144±0.00 N/A
ENST00000413697 1.766±0.00 N/A N/A N/A N/A N/A N/A 2.411±0.00 N/A 3.739±0.00 N/A
ENST00000465835 3.271±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000348 CIL_000348_0001 CGP 2:99318982-99401326
CIL_000347 CIL_000347_0001 CGP 2:99337353-99490035
CIL_000346 CIL_000346_0001 CGP 2:99400475-100142739

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003684 IEA damaged DNA binding
GO:0003887 TAS:IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006260 TAS DNA replication
GO:0006281 TAS:IEA DNA repair
GO:0009411 IDA response to UV
GO:0016779 IEA nucleotidyltransferase activity
GO:0017125 IEA deoxycytidyl transferase activity
GO:0042276 TAS error-prone translesion synthesis
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018296 rev1 REV1, polymerase (DNA directed) protein_coding Danio_rerio
ENSMUSG00000026082 Rev1 REV1 homolog (S. cerevisiae) protein_coding Mus_musculus

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