C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major facilitator superfamily domain containing 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135953 MFSD9 9606 - 2:102715840-102736888 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258436 MFSD9-001 102715840-102736854 protein_coding
  ENST00000411991 MFSD9-002 102718814-102736878 nonsense_mediated_decay
  ENST00000421966 MFSD9-006 102726918-102736888 nonsense_mediated_decay
  ENST00000428085 MFSD9-005 102719004-102732340 nonsense_mediated_decay
  ENST00000437075 MFSD9-004 102717571-102736878 nonsense_mediated_decay
  ENST00000438943 MFSD9-003 102717038-102736878 nonsense_mediated_decay
  ENST00000462099 MFSD9-007 102732286-102736839 retained_intron
  ENST00000496253 MFSD9-008 102715840-102718334 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258436ENST00000411991ENST00000421966ENST00000437075ENST00000438943ENST00000462099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258436 1.026±0.00 0.718±0.00 N/A N/A 1.645±0.00 N/A N/A N/A 0.528±0.00 N/A N/A 0.540±0.32 0.981±0.34 0.567±0.00
ENST00000411991 N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A 0.470±0.00 N/A N/A N/A N/A
ENST00000421966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.806±0.00
ENST00000437075 N/A N/A 0.434±0.00 N/A 0.788±0.00 0.555±0.00 N/A N/A N/A 0.217±0.00 0.181±0.09 0.568±0.00 0.480±0.09 0.491±0.00
ENST00000438943 0.645±0.00 0.595±0.00 N/A 0.173±0.00 N/A N/A 0.010±0.00 N/A N/A N/A 0.162±0.00 0.714±0.00 0.395±0.00 N/A
ENST00000462099 N/A N/A N/A N/A N/A N/A N/A 2.568±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QT CIL_0004QT_0001 CGP 2:102619707-102736888
CIL_0009D6 CIL_0009D6_0001 VISTA 2:102621903-103223410
CIL_0008NY CIL_0008NY_0001 VISTA 2:102631968-103233254
CIL_0008GZ CIL_0008GZ_0001 VISTA 2:102643508-103244514
CIL_0003Y1 CIL_0003Y1_0001 CGP 2:102715840-102843893

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074728 mfsd9 major facilitator superfamily domain containing 9 protein_coding Danio_rerio
ENSMUSG00000041945 Mfsd9 major facilitator superfamily domain containing 9 protein_coding Mus_musculus

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