C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 44
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136014 USP44 9606 - 12:95516560-95551490 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258499 USP44-001 95516560-95551490 protein_coding
  ENST00000393091 USP44-004 95517276-95548844 protein_coding
  ENST00000537435 USP44-002 95518154-95548272 protein_coding
  ENST00000547951 USP44-006 95546450-95548669 processed_transcript
  ENST00000549639 USP44-005 95533923-95548798 protein_coding
  ENST00000551837 USP44-007 95533764-95548819 protein_coding
  ENST00000552237 USP44-008 95524520-95529000 retained_intron
  ENST00000552440 USP44-003 95518143-95534326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000258499ENST00000393091ENST00000537435ENST00000547951ENST00000549639ENST00000552237ENST00000552440
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000258499 N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A 0.043±0.02 2.733±0.15
ENST00000393091 N/A 0.074±0.00 N/A N/A N/A N/A N/A 0.061±0.00 0.068±0.00 7.169±0.00
ENST00000537435 N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 2.728±0.82
ENST00000547951 0.208±0.00 N/A N/A 0.200±0.00 N/A N/A N/A 0.301±0.00 N/A N/A
ENST00000549639 N/A N/A N/A N/A N/A 1.013±0.00 N/A N/A N/A N/A
ENST00000552237 N/A N/A N/A N/A N/A N/A N/A 0.548±0.00 N/A N/A
ENST00000552440 0.231±0.00 N/A N/A N/A 0.125±0.00 N/A 0.087±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y2 CIL_0000Y2_0002 CGP 12:95473520-95551490

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004221 IMP ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007067 IEA mitotic nuclear division
GO:0008234 IEA cysteine-type peptidase activity
GO:0008270 IEA zinc ion binding
GO:0016579 IDA protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060564 IMP negative regulation of mitotic anaphase-promoting complex activity
GO:0090231 IMP regulation of spindle checkpoint
GO:0090266 ISS regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089861 usp44 ubiquitin specific peptidase 44 protein_coding Danio_rerio
ENSMUSG00000020020 Usp44 ubiquitin specific peptidase 44 protein_coding Mus_musculus

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