C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin C1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136040 PLXNC1 9606 + 12:94148723-94307675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258526 PLXNC1-001 94148723-94307675 protein_coding
  ENST00000545312 PLXNC1-004 94262521-94305598 protein_coding
  ENST00000546659 PLXNC1-010 94226489-94227453 retained_intron
  ENST00000546733 PLXNC1-011 94150832-94186765 retained_intron
  ENST00000547057 PLXNC1-003 94254528-94305655 protein_coding
  ENST00000549187 PLXNC1-009 94265131-94279986 retained_intron
  ENST00000549217 PLXNC1-002 94254478-94304325 nonsense_mediated_decay
  ENST00000549810 PLXNC1-007 94248362-94256285 retained_intron
  ENST00000550080 PLXNC1-005 94254518-94259691 protein_coding
  ENST00000551495 PLXNC1-008 94259386-94265094 processed_transcript
  ENST00000551850 PLXNC1-006 94158101-94209629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000258526ENST00000547057
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000258526 1.209±0.00 0.873±0.00 2.011±1.25 1.685±0.61 1.113±0.43 0.196±0.00 0.603±0.35 3.653±1.93 0.226±0.05 2.047±0.23 1.131±0.25 3.155±1.19
ENST00000547057 N/A N/A N/A N/A N/A N/A N/A N/A 0.836±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005102 TAS receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007411 TAS axon guidance
GO:0016020 IEA:IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015278 plxnc1 plexin C1 protein_coding Danio_rerio
ENSMUSG00000074785 Plxnc1 plexin C1 protein_coding Mus_musculus

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