C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoskeleton associated protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136108 CKAP2 9606 + 13:52455429-52476628 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258607 CKAP2-001 52455439-52476349 protein_coding
  ENST00000378034 CKAP2-002 52455439-52465843 protein_coding
  ENST00000378037 CKAP2-003 52455467-52476628 protein_coding
  ENST00000459902 CKAP2-007 52473535-52475142 retained_intron
  ENST00000468284 CKAP2-006 52455429-52461353 protein_coding
  ENST00000480747 CKAP2-005 52456008-52461258 protein_coding
  ENST00000490903 CKAP2-004 52455972-52476349 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258607ENST00000378034ENST00000378037ENST00000459902ENST00000490903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258607 1.149±0.00 0.989±0.00 0.439±0.00 1.391±0.31 1.318±0.26 0.793±0.47 0.786±0.64 0.507±0.00 0.232±0.00 0.261±0.00 1.049±0.00 5.018±4.84 3.834±2.87 10.868±2.83
ENST00000378034 N/A N/A 0.438±0.00 N/A 0.858±0.00 N/A 0.099±0.00 N/A 0.595±0.00 N/A N/A N/A N/A N/A
ENST00000378037 0.287±0.00 0.471±0.00 N/A 1.351±0.00 N/A 1.140±0.00 0.658±0.00 N/A 0.350±0.04 N/A 0.377±0.00 1.364±0.80 0.824±0.51 3.326±0.00
ENST00000459902 N/A N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000490903 N/A N/A N/A 0.508±0.00 N/A N/A 0.132±0.00 N/A N/A 1.048±0.00 N/A 4.458±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000281 IGI mitotic cytokinesis
GO:0005813 IDA centrosome
GO:0005881 IDA cytoplasmic microtubule
GO:0006915 IEA apoptotic process
GO:0007026 IEA negative regulation of microtubule depolymerization
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086112 CKAP2 cytoskeleton associated protein 2 protein_coding Danio_rerio
ENSMUSG00000037725 Ckap2 cytoskeleton associated protein 2 protein_coding Mus_musculus

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