C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136240 KDELR2 9606 - 7:6445953-6484242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258739 KDELR2-001 6461081-6484242 protein_coding
  ENST00000382267 KDELR2-004 6469654-6484149 nonsense_mediated_decay
  ENST00000454368 KDELR2-002 6461762-6470406 retained_intron
  ENST00000462052 KDELR2-005 6474080-6484143 retained_intron
  ENST00000463747 KDELR2-003 6445953-6484190 processed_transcript
  ENST00000490996 KDELR2-006 6462872-6484057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258739ENST00000382267ENST00000490996
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258739 56.530±0.00 53.246±0.00 10.017±0.00 9.016±3.79 38.556±10.55 39.993±5.54 12.000±6.78 56.142±11.23 54.152±36.29 36.505±15.74 10.652±7.29 54.176±15.91 93.314±8.39 48.505±13.77
ENST00000382267 N/A N/A 16.850±0.00 N/A N/A N/A 6.279±0.00 N/A 34.839±0.00 N/A N/A N/A N/A N/A
ENST00000490996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.809±0.00 66.359±0.00 111.231±0.00 107.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027I CIL_00027I_0002 CGP 7:6409126-6484242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005046 TAS KDEL sequence binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 TAS Golgi apparatus
GO:0005801 IEA cis-Golgi network
GO:0006621 IEA protein retention in ER lumen
GO:0006886 TAS intracellular protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0046923 IEA ER retention sequence binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005254 kdelr2a KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a protein_coding Danio_rerio
ENSDARG00000037361 kdelr2b KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2b protein_coding Danio_rerio
ENSMUSG00000079111 Kdelr2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein_coding Mus_musculus

Loading