C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium and integrin binding family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136425 CIB2 9606 - 15:78104606-78131544 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258930 CIB2-001 78104606-78131544 protein_coding
  ENST00000539011 CIB2-002 78104649-78131535 protein_coding
  ENST00000557818 CIB2-004 78105188-78111266 nonsense_mediated_decay
  ENST00000557846 CIB2-006 78105012-78131433 protein_coding
  ENST00000557917 CIB2-007 78105284-78131271 nonsense_mediated_decay
  ENST00000559054 CIB2-003 78109288-78131271 protein_coding
  ENST00000559645 CIB2-009 78105854-78131235 protein_coding
  ENST00000560618 CIB2-005 78105490-78131263 protein_coding
  ENST00000561190 CIB2-008 78105299-78131225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000258930ENST00000539011ENST00000557818
Transcript ID Ovary Placenta
ENST00000258930 N/A 8.140±0.00
ENST00000539011 15.098±0.00 N/A
ENST00000557818 23.132±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UM CIL_0001UM_0001 CGP 15:78104606-78171949

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001917 ISS photoreceptor inner segment
GO:0005178 IEA integrin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005927 IEA muscle tendon junction
GO:0031594 IEA neuromuscular junction
GO:0032403 IEA protein complex binding
GO:0042383 IEA sarcolemma
GO:0045494 ISS photoreceptor cell maintenance
GO:0055074 ISS calcium ion homeostasis
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032626 cib2 calcium and integrin binding family member 2 protein_coding Danio_rerio
ENSMUSG00000037493 Cib2 calcium and integrin binding family member 2 protein_coding Mus_musculus

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