C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: radical S-adenosyl methionine domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136444 RSAD1 9606 + 17:50478800-50485975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258955 RSAD1-001 50478800-50485975 protein_coding
  ENST00000443328 RSAD1-002 50478860-50480629 retained_intron
  ENST00000504284 RSAD1-004 50478903-50484819 nonsense_mediated_decay
  ENST00000506211 RSAD1-006 50482097-50484998 nonsense_mediated_decay
  ENST00000509398 RSAD1-007 50482364-50483535 retained_intron
  ENST00000510554 RSAD1-005 50479048-50479918 protein_coding
  ENST00000513650 RSAD1-008 50484029-50484863 retained_intron
  ENST00000515221 RSAD1-003 50478860-50484897 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258955ENST00000443328ENST00000504284ENST00000509398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258955 9.798±0.00 4.691±0.00 0.879±0.00 5.192±3.35 2.133±1.33 3.937±0.79 4.349±3.54 8.375±6.14 7.442±0.00 3.059±2.74 5.252±1.40 13.959±8.01 8.977±1.06 6.012±2.43
ENST00000443328 N/A N/A 0.965±0.00 N/A 0.735±0.00 N/A N/A N/A 1.177±0.00 0.543±0.00 N/A N/A N/A N/A
ENST00000504284 N/A N/A N/A N/A N/A N/A N/A N/A 1.025±0.00 N/A N/A N/A N/A N/A
ENST00000509398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.774±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004109 IEA coproporphyrinogen oxidase activity
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006779 IEA porphyrin-containing compound biosynthetic process
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077698 rsad1 radical S-adenosyl methionine domain containing 1 protein_coding Danio_rerio
ENSMUSG00000039096 Rsad1 radical S-adenosyl methionine domain containing 1 protein_coding Mus_musculus

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