C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COBW domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136682 CBWD2 9606 + 2:113437691-113496189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259199 CBWD2-001 113437691-113496189 protein_coding
  ENST00000358604 CBWD2-004 113437791-113496119 nonsense_mediated_decay
  ENST00000416503 CBWD2-201 113437763-113496171 protein_coding
  ENST00000433343 CBWD2-202 113437788-113495797 protein_coding
  ENST00000456188 CBWD2-006 113437822-113495799 nonsense_mediated_decay
  ENST00000463627 CBWD2-014 113437817-113441729 retained_intron
  ENST00000468417 CBWD2-012 113481518-113496121 retained_intron
  ENST00000479583 CBWD2-011 113468585-113496119 retained_intron
  ENST00000490323 CBWD2-005 113437839-113444375 retained_intron
  ENST00000490446 CBWD2-016 113443762-113445540 retained_intron
  ENST00000492566 CBWD2-015 113437879-113462834 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259199ENST00000358604ENST00000416503ENST00000433343ENST00000456188ENST00000463627ENST00000468417ENST00000479583ENST00000490323ENST00000492566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259199 0.373±0.00 0.270±0.00 N/A 0.559±0.35 N/A N/A 0.385±0.10 0.384±0.00 N/A N/A N/A 0.411±0.22 0.397±0.06 N/A
ENST00000358604 N/A N/A N/A N/A N/A 0.810±0.00 N/A N/A 1.167±0.00 N/A N/A 0.480±0.00 0.520±0.00 N/A
ENST00000416503 N/A N/A N/A 0.212±0.00 0.989±0.50 0.609±0.00 0.541±0.04 0.812±0.00 0.265±0.00 0.488±0.00 0.204±0.03 N/A N/A 0.852±0.00
ENST00000433343 N/A N/A N/A N/A N/A N/A N/A 0.804±0.00 N/A N/A N/A N/A 0.264±0.00 N/A
ENST00000456188 N/A 0.623±0.00 N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A 0.730±0.58 1.031±0.00 0.580±0.00
ENST00000463627 N/A N/A 4.970±0.00 N/A N/A 6.468±0.00 1.749±0.00 7.582±0.00 3.952±0.00 N/A 3.426±0.00 N/A N/A N/A
ENST00000468417 N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479583 N/A 0.173±0.00 0.384±0.00 0.069±0.00 0.100±0.00 0.408±0.00 N/A N/A N/A N/A 0.092±0.04 0.609±0.22 N/A N/A
ENST00000490323 N/A N/A 1.484±0.00 N/A N/A 1.470±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492566 1.705±0.00 1.854±0.00 N/A 1.223±0.48 1.246±0.00 2.015±0.51 2.382±0.00 2.171±1.02 1.557±0.06 0.782±0.00 1.011±0.56 3.924±3.89 2.354±1.69 4.075±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038H CIL_00038H_0002 CGP 2:113437691-113501155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004318 cbwd COBW domain containing protein_coding Danio_rerio
ENSMUSG00000024878 Cbwd1 COBW domain containing 1 protein_coding Mus_musculus

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