C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bridging integrator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136717 BIN1 9606 - 2:127048027-127107355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259238 BIN1-004 127048027-127107288 protein_coding
  ENST00000316724 BIN1-001 127048027-127107355 protein_coding
  ENST00000346226 BIN1-005 127048027-127107288 protein_coding
  ENST00000348750 BIN1-010 127048027-127107288 protein_coding
  ENST00000351659 BIN1-003 127048027-127107288 protein_coding
  ENST00000352848 BIN1-008 127048027-127107288 protein_coding
  ENST00000357970 BIN1-002 127048027-127107288 protein_coding
  ENST00000376113 BIN1-012 127048027-127107001 protein_coding
  ENST00000393040 BIN1-006 127048027-127107288 protein_coding
  ENST00000393041 BIN1-007 127048027-127107288 protein_coding
  ENST00000409400 BIN1-011 127048038-127107278 protein_coding
  ENST00000462958 BIN1-013 127048033-127056491 retained_intron
  ENST00000466111 BIN1-014 127050382-127064928 processed_transcript
  ENST00000484253 BIN1-016 127050408-127064810 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316724ENST00000348750ENST00000351659ENST00000352848ENST00000376113ENST00000393040ENST00000409400ENST00000462958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316724 N/A N/A N/A 23.798±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000348750 5.309±0.00 19.210±0.00 4.622±0.00 22.458±13.95 N/A N/A N/A N/A N/A 2.750±0.00 N/A 23.052±18.54 10.496±5.14 N/A
ENST00000351659 N/A N/A N/A 5.295±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.850±2.56
ENST00000352848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 211.875±112.78 N/A N/A N/A
ENST00000376113 N/A N/A N/A N/A 33.543±0.00 N/A 1.924±0.00 N/A N/A N/A 271.219±202.45 N/A N/A 12.546±0.00
ENST00000393040 7.531±0.00 9.701±0.00 N/A N/A 3.548±0.00 23.110±0.00 N/A N/A 6.742±0.00 7.608±0.00 N/A 32.330±9.31 16.558±1.27 6.193±0.00
ENST00000409400 15.698±0.00 14.601±0.00 2.337±0.00 97.200±0.00 50.339±0.00 17.845±0.00 2.666±2.18 36.723±35.07 12.404±0.00 16.319±0.00 N/A 32.059±8.33 13.403±4.33 12.431±9.78
ENST00000462958 N/A N/A N/A 10.030±0.00 N/A 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A 0.890±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0006897 IEA endocytosis
GO:0008021 IEA synaptic vesicle
GO:0008283 TAS cell proliferation
GO:0015629 TAS actin cytoskeleton
GO:0016032 IEA viral process
GO:0030018 ISS Z disc
GO:0030315 ISS T-tubule
GO:0030424 IDA axon
GO:0031674 ISS I band
GO:0032403 IEA protein complex binding
GO:0033268 ISS node of Ranvier
GO:0042692 IEA muscle cell differentiation
GO:0042802 IPI identical protein binding
GO:0043065 IMP positive regulation of apoptotic process
GO:0043194 ISS axon initial segment
GO:0043196 IEA varicosity
GO:0043547 IEA positive regulation of GTPase activity
GO:0043679 IEA axon terminus
GO:0044300 IEA cerebellar mossy fiber
GO:0045664 IMP regulation of neuron differentiation
GO:0045807 IEA positive regulation of endocytosis
GO:0046982 IEA protein heterodimerization activity
GO:0048156 IPI tau protein binding
GO:0048711 IMP positive regulation of astrocyte differentiation
GO:0051020 IEA GTPase binding
GO:0060987 IMP lipid tube
GO:0060988 IMP lipid tube assembly
GO:0071156 IDA regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042114 BIN1 (1 of 2) bridging integrator 1 protein_coding Danio_rerio
ENSDARG00000058820 bin1 bridging integrator 1 protein_coding Danio_rerio
ENSMUSG00000024381 Bin1 bridging integrator 1 protein_coding Mus_musculus

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