C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 31 (copper transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136868 SLC31A1 9606 + 9:113221562-113264492 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374212 SLC31A1-001 113221562-113264492 protein_coding
  ENST00000496650 SLC31A1-003 113221587-113227660 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374212
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374212 4.109±0.00 3.101±0.00 1.466±0.00 0.833±0.28 3.047±1.81 2.244±0.08 2.159±1.00 12.180±5.79 9.967±7.54 3.978±1.36 0.660±0.14 3.902±1.35 6.573±0.89 3.767±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PB CIL_0000PB_0001 CGP 9:113161006-113264492
CIL_0002CC CIL_0002CC_0002 CGP 9:113221562-113275589

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005375 TAS:IEA copper ion transmembrane transporter activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005770 IEA late endosome
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006825 TAS copper ion transport
GO:0006855 IEA drug transmembrane transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0015088 IEA copper uptake transmembrane transporter activity
GO:0015677 IEA copper ion import
GO:0016021 IEA integral component of membrane
GO:0035434 IEA copper ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0055037 IEA recycling endosome
GO:0055085 TAS transmembrane transport
GO:0072719 IEA cellular response to cisplatin
GO:1902861 IEA copper ion import into cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013961 slc31a1 solute carrier family 31 (copper transporters), member 1 protein_coding Danio_rerio
ENSMUSG00000066150 Slc31a1 solute carrier family 31, member 1 protein_coding Mus_musculus

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