C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137225 CAPN11 9606 + 6:44158811-44184402 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398776 CAPN11-001 44158811-44184402 protein_coding
  ENST00000524554 CAPN11-002 44176551-44181321 retained_intron
  ENST00000526118 CAPN11-004 44158820-44169967 nonsense_mediated_decay
  ENST00000532171 CAPN11-005 44158811-44172349 protein_coding
  ENST00000533604 CAPN11-003 44176616-44183267 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398776ENST00000524554ENST00000533604
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398776 0.762±0.00 0.395±0.00 0.024±0.00 0.832±0.00 0.165±0.00 N/A 0.010±0.00 0.022±0.00 0.154±0.00 0.052±0.00 0.048±0.01 0.357±0.00 23.992±9.02
ENST00000524554 N/A N/A N/A N/A 0.033±0.00 N/A 0.053±0.00 N/A N/A N/A 0.125±0.03 N/A N/A
ENST00000533604 0.387±0.00 0.404±0.00 N/A 0.710±0.21 N/A 0.143±0.00 N/A 0.157±0.05 0.064±0.01 0.054±0.00 0.077±0.00 0.544±0.51 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0004198 IBA:IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0006508 IBA:IEA proteolysis
GO:0008233 TAS peptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000058626 Capn11 calpain 11 protein_coding Mus_musculus

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