C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, beta 2A class IIa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137267 TUBB2A 9606 - 6:3153669-3157526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333628 TUBB2A-001 3153669-3157526 protein_coding
  ENST00000489942 TUBB2A-002 3154579-3157526 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333628ENST00000489942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333628 6.063±0.00 3.618±0.00 0.793±0.00 71.496±22.80 17.249±15.51 4.159±3.68 1.821±1.41 9.690±5.83 5.495±4.41 2.834±2.54 1.824±0.85 5.639±3.46 26.138±8.76 2.968±2.09
ENST00000489942 N/A N/A 0.278±0.00 N/A 0.390±0.00 0.543±0.00 N/A N/A 2.007±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IT CIL_0003IT_0001 CGP 6:3118374-3157526
CIL_0003IU CIL_0003IU_0001 CGP 6:3153669-3231730

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IDA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006457 TAS protein folding
GO:0007017 IEA microtubule-based process
GO:0031982 IDA vesicle
GO:0043234 IEA protein complex
GO:0044267 TAS cellular protein metabolic process
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051258 IEA protein polymerization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039522 protein_coding Danio_rerio
ENSDARG00000086257 FP102463.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000058672 Tubb2a tubulin, beta 2A class IIA protein_coding Mus_musculus

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