C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, beta 2B class IIb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137285 TUBB2B 9606 - 6:3224261-3231730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259818 TUBB2B-001 3224261-3227735 protein_coding
  ENST00000473006 TUBB2B-002 3224283-3231730 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyOvaryTestisENST00000259818ENST00000473006
Transcript ID Bladder Brain Breast Colon Heart Kidney Ovary Testis
ENST00000259818 1.594±0.00 72.656±33.17 4.670±0.00 6.955±0.00 N/A 9.045±0.00 8.395±0.00 4.785±0.00
ENST00000473006 N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IU CIL_0003IU_0001 CGP 6:3153669-3231730
CIL_0003IV CIL_0003IV_0001 CGP 6:3224261-3303373

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IDA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006457 TAS protein folding
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0044267 TAS cellular protein metabolic process
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039522 protein_coding Danio_rerio
ENSDARG00000086257 FP102463.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000045136 Tubb2b tubulin, beta 2B class IIB protein_coding Mus_musculus

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