C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 2B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137491 SLCO2B1 9606 + 11:75100563-75206549 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289575 SLCO2B1-001 75150987-75206549 protein_coding
  ENST00000341411 SLCO2B1-012 75203381-75206254 retained_intron
  ENST00000428359 SLCO2B1-005 75159788-75204717 protein_coding
  ENST00000454962 SLCO2B1-006 75151213-75206102 protein_coding
  ENST00000525650 SLCO2B1-002 75151115-75204736 protein_coding
  ENST00000525845 SLCO2B1-009 75159780-75164012 protein_coding
  ENST00000526660 SLCO2B1-013 75100563-75188233 processed_transcript
  ENST00000526839 SLCO2B1-019 75165874-75170004 protein_coding
  ENST00000527180 SLCO2B1-016 75157071-75169241 protein_coding
  ENST00000528108 SLCO2B1-018 75196275-75200400 retained_intron
  ENST00000530012 SLCO2B1-017 75196254-75203408 retained_intron
  ENST00000530015 SLCO2B1-011 75199554-75206400 retained_intron
  ENST00000530556 SLCO2B1-007 75151788-75164012 protein_coding
  ENST00000531457 SLCO2B1-014 75151079-75162923 retained_intron
  ENST00000531713 SLCO2B1-010 75100591-75165830 protein_coding
  ENST00000531756 SLCO2B1-004 75151070-75203310 retained_intron
  ENST00000532236 SLCO2B1-003 75151061-75204991 protein_coding
  ENST00000534004 SLCO2B1-008 75152325-75164012 protein_coding
  ENST00000534186 SLCO2B1-015 75159784-75165948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289575ENST00000428359ENST00000454962ENST00000530015ENST00000531756ENST00000532236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289575 10.928±0.00 8.211±0.00 1.211±0.00 4.106±3.42 2.368±0.61 N/A 2.559±0.00 3.214±0.00 N/A 3.686±0.00 N/A 3.479±1.86 13.797±7.68 2.026±0.00
ENST00000428359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A N/A
ENST00000454962 18.538±0.00 14.453±0.00 N/A 16.599±0.00 4.602±2.58 2.867±0.21 4.976±0.00 6.816±0.00 43.978±0.00 8.975±6.68 1.795±0.00 4.888±2.41 16.826±3.62 7.567±0.00
ENST00000530015 N/A N/A N/A N/A N/A 0.247±0.00 0.714±0.00 1.347±0.00 N/A 1.561±0.57 N/A 0.719±0.24 N/A N/A
ENST00000531756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.694±0.00 N/A N/A N/A
ENST00000532236 N/A N/A N/A N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0001 VISTA 11:74770295-75374240

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0008514 IDA organic anion transmembrane transporter activity
GO:0015125 IEA bile acid transmembrane transporter activity
GO:0015347 IEA sodium-independent organic anion transmembrane transporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0043252 TAS sodium-independent organic anion transport
GO:0055085 IEA transmembrane transport
GO:0071718 IEA sodium-independent icosanoid transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054609 slco2b1 solute carrier organic anion transporter family, member 2B1 protein_coding Danio_rerio
ENSMUSG00000030737 Slco2b1 solute carrier organic anion transporter family, member 2b1 protein_coding Mus_musculus

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