C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 90B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137500 CCDC90B 9606 - 11:83259097-83286407 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260054 CCDC90B-002 83261456-83286354 nonsense_mediated_decay
  ENST00000455220 CCDC90B-003 83261317-83286390 protein_coding
  ENST00000525503 CCDC90B-006 83261456-83286351 protein_coding
  ENST00000525504 CCDC90B-019 83261456-83267472 processed_transcript
  ENST00000525916 CCDC90B-015 83273677-83285968 processed_transcript
  ENST00000526265 CCDC90B-005 83273246-83285988 nonsense_mediated_decay
  ENST00000526631 CCDC90B-014 83274443-83285978 retained_intron
  ENST00000527025 CCDC90B-011 83265900-83285990 nonsense_mediated_decay
  ENST00000527495 CCDC90B-018 83261730-83278830 protein_coding
  ENST00000528149 CCDC90B-010 83265916-83286085 nonsense_mediated_decay
  ENST00000529073 CCDC90B-017 83261929-83285978 protein_coding
  ENST00000529312 CCDC90B-013 83261891-83285979 nonsense_mediated_decay
  ENST00000529611 CCDC90B-004 83261462-83285998 protein_coding
  ENST00000529689 CCDC90B-001 83259097-83286407 protein_coding
  ENST00000529745 CCDC90B-009 83261757-83286210 nonsense_mediated_decay
  ENST00000529856 CCDC90B-008 83261796-83286355 nonsense_mediated_decay
  ENST00000530253 CCDC90B-016 83274177-83285964 retained_intron
  ENST00000533761 CCDC90B-007 83261795-83285964 nonsense_mediated_decay
  ENST00000534753 CCDC90B-012 83265890-83285988 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000525503ENST00000525504ENST00000529745ENST00000534753
Transcript ID Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000525503 N/A 15.132±0.00 N/A N/A 3.521±0.00 17.065±0.11 6.180±0.91 35.009±0.00
ENST00000525504 N/A N/A N/A N/A N/A 29.209±0.00 23.720±0.00 N/A
ENST00000529745 36.145±0.00 N/A 17.659±0.00 13.090±0.00 3.374±0.00 N/A 9.119±1.84 59.412±0.00
ENST00000534753 N/A N/A N/A N/A N/A N/A 20.828±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044626 ccdc90b coiled-coil domain containing 90B protein_coding Danio_rerio
ENSMUSG00000030613 Ccdc90b coiled-coil domain containing 90B protein_coding Mus_musculus

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