C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein, large, P1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137818 RPLP1 9606 + 15:69452784-69456194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260379 RPLP1-001 69452784-69456194 protein_coding
  ENST00000357790 RPLP1-002 69452814-69455547 protein_coding
  ENST00000487304 RPLP1-003 69452819-69455546 retained_intron
  ENST00000488122 RPLP1-004 69453019-69455546 retained_intron
  ENST00000560274 RPLP1-006 69452884-69455546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260379ENST00000357790ENST00000488122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260379 69.745±0.00 130.528±0.00 115.114±0.00 38.500±28.35 142.980±98.18 197.583±129.04 49.956±6.98 105.493±77.20 78.201±20.95 115.217±39.89 423.710±106.48 352.398±225.86 313.987±170.16 39.167±18.48
ENST00000357790 600.999±0.00 1108.370±0.00 N/A 136.641±0.00 514.583±0.00 893.440±0.00 473.404±0.00 511.281±0.00 599.859±0.00 945.806±0.00 2978.780±0.00 1886.670±440.20 1129.852±167.67 396.218±117.23
ENST00000488122 175.934±0.00 277.307±0.00 N/A 59.798±0.00 141.500±0.00 273.287±0.00 N/A 153.587±0.00 53.817±0.00 N/A 334.297±0.00 296.887±0.00 199.995±0.00 130.436±74.97

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS:IEA translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021864 rplp1 ribosomal protein, large, P1 protein_coding Danio_rerio
ENSMUSG00000007892 Rplp1 ribosomal protein, large, P1 protein_coding Mus_musculus
ENSMUSG00000060019 Gm10073 predicted pseudogene 10073 protein_coding Mus_musculus
ENSMUSG00000090460 Gm17511 predicted gene, 17511 protein_coding Mus_musculus

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