C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating signal cointegrator 1 complex subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138303 ASCC1 9606 - 10:72096032-72217134 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317126 ASCC1-008 72097254-72217134 protein_coding
  ENST00000317168 ASCC1-003 72096521-72216288 protein_coding
  ENST00000342444 ASCC1-004 72096521-72216275 protein_coding
  ENST00000394915 ASCC1-201 72102369-72216109 protein_coding
  ENST00000394919 ASCC1-202 72096032-72216109 protein_coding
  ENST00000461369 ASCC1-007 72161613-72204505 nonsense_mediated_decay
  ENST00000486689 ASCC1-009 72096522-72210737 protein_coding
  ENST00000492502 ASCC1-006 72203442-72216257 processed_transcript
  ENST00000524829 ASCC1-010 72196930-72216311 protein_coding
  ENST00000525286 ASCC1-015 72128082-72196989 protein_coding
  ENST00000526751 ASCC1-014 72203427-72215973 protein_coding
  ENST00000526801 ASCC1-018 72152898-72159375 processed_transcript
  ENST00000527593 ASCC1-012 72196843-72216276 protein_coding
  ENST00000530394 ASCC1-017 72097041-72161556 protein_coding
  ENST00000530461 ASCC1-011 72196811-72216286 protein_coding
  ENST00000531048 ASCC1-016 72161549-72213331 protein_coding
  ENST00000532011 ASCC1-021 72196938-72216282 nonsense_mediated_decay
  ENST00000533958 ASCC1-013 72210775-72216275 protein_coding
  ENST00000534259 ASCC1-019 72096522-72134463 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000317126ENST00000317168ENST00000486689
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000317126 N/A 2.070±0.00 N/A N/A N/A N/A 5.455±0.00 N/A N/A N/A N/A N/A
ENST00000317168 10.119±0.00 1.906±0.00 8.166±0.41 4.558±0.00 3.053±0.00 3.979±0.00 N/A 5.694±0.00 5.874±0.00 7.284±0.34 5.969±0.59 16.821±0.00
ENST00000486689 N/A N/A 5.463±0.00 N/A N/A N/A N/A N/A N/A 6.396±0.00 7.183±0.00 12.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VS CIL_0007VS_0001 VISTA 10:71953326-72556599
CIL_0000Q0 CIL_0000Q0_0002 CGP 10:72096032-72235860

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003824 IEA catalytic activity
GO:0005667 IDA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IDA regulation of transcription, DNA-templated
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037617 activating signal cointegrator 1 complex subunit 1 protein_coding Danio_rerio
ENSMUSG00000044475 Ascc1 activating signal cointegrator 1 complex subunit 1 protein_coding Mus_musculus

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