C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducer and activator of transcription 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138378 STAT4 9606 - 2:191029576-191151596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358470 STAT4-001 191029576-191151590 protein_coding
  ENST00000392320 STAT4-002 191029580-191151260 protein_coding
  ENST00000409995 STAT4-007 191131491-191150971 protein_coding
  ENST00000413064 STAT4-006 191076227-191151560 protein_coding
  ENST00000432798 STAT4-005 191148128-191151595 protein_coding
  ENST00000450994 STAT4-004 191146649-191151596 protein_coding
  ENST00000463951 STAT4-010 191031208-191033607 retained_intron
  ENST00000470708 STAT4-011 191036178-191041683 processed_transcript
  ENST00000495326 STAT4-008 191076024-191151015 retained_intron
  ENST00000495849 STAT4-009 191032862-191151013 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358470ENST00000392320ENST00000409995ENST00000463951ENST00000495326ENST00000495849
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358470 N/A N/A N/A N/A 0.716±0.00 0.397±0.22 N/A 0.196±0.00 N/A N/A 0.106±0.00 0.322±0.00 0.539±0.00 6.170±2.46
ENST00000392320 0.292±0.00 2.166±0.00 N/A 5.416±1.25 0.350±0.07 N/A 0.182±0.00 N/A N/A N/A N/A 0.558±0.00 N/A N/A
ENST00000409995 N/A N/A 0.213±0.00 N/A N/A N/A N/A 0.717±0.00 1.445±0.00 N/A N/A N/A N/A N/A
ENST00000463951 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000495326 N/A N/A 0.310±0.00 3.760±0.00 2.867±0.00 0.778±0.00 N/A N/A N/A 2.740±0.00 N/A N/A N/A N/A
ENST00000495849 N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A 1.613±0.00 0.023±0.00 N/A 0.320±0.00 6.331±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0001 VISTA 2:190761403-191362006

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0007165 IEA signal transduction
GO:0007259 TAS JAK-STAT cascade
GO:0008283 IEA cell proliferation
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0071310 IEA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028731 stat4 signal transducer and activator of transcription 4 protein_coding Danio_rerio
ENSMUSG00000062939 Stat4 signal transducer and activator of transcription 4 protein_coding Mus_musculus

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