C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hydroxyacyl-CoA dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138796 HADH 9606 + 4:107989714-108035175 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309522 HADH-001 107989784-108035175 protein_coding
  ENST00000403312 HADH-002 107989714-108035175 protein_coding
  ENST00000505878 HADH-003 107989902-108035171 protein_coding
  ENST00000507260 HADH-009 108014470-108027934 retained_intron
  ENST00000510728 HADH-006 108027512-108034492 processed_transcript
  ENST00000511742 HADH-004 107989855-108005334 nonsense_mediated_decay
  ENST00000514776 HADH-007 108033000-108034492 retained_intron
  ENST00000515462 HADH-008 108027715-108034492 retained_intron
  ENST00000603302 HADH-201 107989714-108035174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309522ENST00000505878ENST00000507260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309522 31.771±0.00 10.639±0.00 5.122±0.00 5.882±3.83 29.360±24.12 21.515±4.73 42.107±32.10 25.277±6.73 22.822±19.18 7.614±4.79 22.982±9.95 21.855±10.86 17.754±8.85 36.761±13.84
ENST00000505878 N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507260 N/A N/A 3.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097H CIL_00097H_0001 VISTA 4:107841068-108442627

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003857 TAS:IEA 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005759 TAS mitochondrial matrix
GO:0006631 IEA fatty acid metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0009725 IEA response to hormone
GO:0014823 IEA response to activity
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0032868 IEA response to insulin
GO:0042493 IEA response to drug
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046676 IEA negative regulation of insulin secretion
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070403 IEA NAD+ binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030765 hadh hydroxyacyl-Coenzyme A dehydrogenase protein_coding Danio_rerio
ENSMUSG00000027984 Hadh hydroxyacyl-Coenzyme A dehydrogenase protein_coding Mus_musculus

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