C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 46, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139508 SLC46A3 9606 - 13:28700064-28718970 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266943 SLC46A3-003 28700080-28718841 protein_coding
  ENST00000380814 SLC46A3-001 28700717-28718970 protein_coding
  ENST00000475385 SLC46A3-002 28700064-28704557 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266943ENST00000380814ENST00000475385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266943 2.263±0.00 3.324±0.00 0.986±0.00 1.285±0.00 3.244±1.56 3.161±0.94 2.566±1.32 4.326±0.00 7.488±6.33 1.924±0.70 0.755±0.31 3.621±1.56 2.318±0.13 4.154±1.76
ENST00000380814 N/A N/A N/A 0.399±0.00 1.068±0.00 N/A 0.569±0.00 N/A N/A N/A 1.309±0.00 2.402±0.00 N/A N/A
ENST00000475385 N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A 1.472±0.28 0.481±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CI CIL_0004CI_0001 CGP 13:28659104-28718970
CIL_0004CJ CIL_0004CJ_0001 CGP 13:28700064-29505947

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077313 slc46a3 solute carrier family 46, member 3 protein_coding Danio_rerio
ENSDARG00000079933 SLC46A3 (2 of 2) solute carrier family 46, member 3 protein_coding Danio_rerio
ENSMUSG00000029650 Slc46a3 solute carrier family 46, member 3 protein_coding Mus_musculus

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