C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine sulfinic acid decarboxylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139631 CSAD 9606 - 12:53157663-53180909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267085 CSAD-004 53157663-53180596 protein_coding
  ENST00000379843 CSAD-201 53157689-53173775 protein_coding
  ENST00000379846 CSAD-002 53157694-53180596 protein_coding
  ENST00000379850 CSAD-003 53157690-53180596 protein_coding
  ENST00000424845 CSAD-010 53170071-53173790 nonsense_mediated_decay
  ENST00000424990 CSAD-005 53171895-53180598 protein_coding
  ENST00000437073 CSAD-009 53171404-53180646 protein_coding
  ENST00000444623 CSAD-017 53158139-53180909 protein_coding
  ENST00000453446 CSAD-019 53158511-53180646 protein_coding
  ENST00000454442 CSAD-008 53170071-53172371 processed_transcript
  ENST00000461392 CSAD-006 53173269-53173944 retained_intron
  ENST00000472908 CSAD-016 53164622-53170653 retained_intron
  ENST00000475890 CSAD-001 53157689-53173770 nonsense_mediated_decay
  ENST00000483632 CSAD-011 53161322-53173374 nonsense_mediated_decay
  ENST00000485004 CSAD-013 53160291-53170890 retained_intron
  ENST00000490589 CSAD-015 53160277-53170376 retained_intron
  ENST00000490923 CSAD-014 53159887-53170712 retained_intron
  ENST00000491654 CSAD-012 53171665-53173492 processed_transcript
  ENST00000498635 CSAD-007 53171946-53173919 protein_coding
  ENST00000548698 CSAD-020 53161164-53173770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMusclePlacentaTestisENST00000267085ENST00000379846ENST00000379850ENST00000444623ENST00000453446ENST00000472908
Transcript ID Brain Liver Muscle Placenta Testis
ENST00000267085 3.066±0.00 N/A N/A N/A 3.659±0.00
ENST00000379846 N/A 3.574±0.00 N/A N/A N/A
ENST00000379850 N/A N/A N/A 1.753±0.00 N/A
ENST00000444623 N/A 4.733±0.00 N/A N/A 6.594±0.00
ENST00000453446 N/A 1.882±0.00 N/A N/A N/A
ENST00000472908 N/A N/A 3.461±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TC CIL_0006TC_0001 CGP 12:53103518-53180909
CIL_0006T6 CIL_0006T6_0001 CGP 12:53157663-53195141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0000098 TAS sulfur amino acid catabolic process
GO:0004782 IEA sulfinoalanine decarboxylase activity
GO:0006520 IEA cellular amino acid metabolic process
GO:0008152 IEA metabolic process
GO:0016829 IEA lyase activity
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042412 IEA taurine biosynthetic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026348 csad cysteine sulfinic acid decarboxylase protein_coding Danio_rerio
ENSMUSG00000023044 Csad cysteine sulfinic acid decarboxylase protein_coding Mus_musculus

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